RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 FAM133BQ5BKY9 247 aaKnown RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 HP1BP3Q5SSJ5 553 aaPredicted RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 SPOUT1Q5T280 376 aaKnown RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 NADSYN1Q6IA69 706 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 PSRC1Q6PGN9 363 aaPredicted RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 LEKR1Q6ZMV7 388 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 TIFABQ6ZNK6 161 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 DNAJB7Q7Z6W7 309 aaPredicted RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 TMEM150AQ86TG1 271 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 LINC00523Q86TU6 105 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 TMEM135Q86UB9 458 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 ITIH5Q86UX2 942 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 SLC26A11Q86WA9 606 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 LRRC6Q86X45 466 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 FIBCD1Q8N539 461 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 TAB3Q8N5C8 712 aaPredicted RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 ATPAF2Q8N5M1 289 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 CCDC33Q8N5R6 958 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 HERVK_113Q902F9 699 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 IGSF8Q969P0 613 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 TADA1Q96BN2 335 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 STAMBPL1Q96FJ0 436 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 OXNAD1Q96HP4 312 aaPredicted RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 SGSM3Q96HU1 749 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 ZNF599Q96NL3 588 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 ZNF317Q96PQ6 595 aaPredicted RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 YME1L1Q96TA2 773 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 PAFAH2Q99487 392 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 KLF16Q9BXK1 252 aaPredicted RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 CCSER2Q9H7U1 834 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 LRRC40Q9H9A6 602 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 IL21Q9HBE4 155 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 CYP4F11Q9HBI6 524 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 ARNT2Q9HBZ2 717 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 GLOD4Q9HC38 313 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 INTS9Q9NV88 658 aaKnown RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 MPP6Q9NZW5 540 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 CTNNAL1Q9UBT7 734 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 IPO11Q9UI26 975 aaKnown RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 GGA2Q9UJY4 613 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 VANGL2Q9ULK5 521 aa8.23□□□□□ -1.09
SFPQ-202ENST00000460428 SMG5Q9UPR3 1016 aaKnown RBP8.23□□□□□ -1.09
SFPQ-202ENST00000460428 CHD5Q8TDI0 1954 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 IQANK1A0A1B0GTG1 560 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 FAM237BA0A1B0GVD1 139 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 TMEM120BA0PK00 339 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 GMNCA6NCL1 334 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 FAM47DPA6NHR8 397 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 SMIM23A6NLE4 172 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 SOBPA7XYQ1 873 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 H3BNC9 293 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 COCHO43405 550 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 ANXA9O76027 345 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CNTN5O94779 1100 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 USP1O94782 785 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 FAM107AO95990 144 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 MOCS2O96007 188 aaPredicted RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CPP00450 1065 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CREB1P16220 341 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 NFKB1P19838 968 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 TACR2P21452 398 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CNTFP26441 200 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 SLC11A2P49281 568 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 HARS2P49590 506 aaKnown RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 SERPINB9P50453 376 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 PAPOLAP51003 745 aaKnown RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 RENBPP51606 427 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 EPHB3P54753 998 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CDH4P55283 916 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 UBE3AQ05086 875 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CDH17Q12864 832 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 MPP3Q13368 585 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 VEPH1Q14D04 833 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 KBTBD12Q3ZCT8 623 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 PABPC1LQ4VXU2 614 aaKnown RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 ALFQ53S48 1182 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 SPANXN3Q5MJ09 141 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 TMEM240Q5SV17 173 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 LGSNQ5TDP6 509 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 TMCO4Q5TGY1 634 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 TTC39BQ5VTQ0 682 aaPredicted RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 RAP1GAP2Q684P5 730 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 ALG1LQ6GMV1 187 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 NAPEPLDQ6IQ20 393 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 RANBP10Q6VN20 620 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 ARHGAP36Q6ZRI8 547 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 RGS9BPQ6ZS82 235 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 MARK2Q7KZI7 788 aaKnown RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CHST9Q7L1S5 443 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 OTOP2Q7RTS6 562 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 TMCO2Q7Z6W1 182 aaPredicted RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 PRPF39Q86UA1 669 aaKnown RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 FAM217AQ8IXS0 508 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 MPP5Q8N3R9 675 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 MDM1Q8TC05 714 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 PTCD2Q8WV60 388 aaKnown RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 MTBPQ96DY7 904 aa8.22□□□□□ -1.09
SFPQ-202ENST00000460428 CELF6Q96J87 481 aaKnown RBP8.22□□□□□ -1.09
SFPQ-202ENST00000460428 RAD9AQ99638 391 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms