RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 SH3RF2Q8TEC5 729 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 USP13Q92995 863 aaPredicted RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 WBP2Q969T9 261 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 LRRC3BQ96PB8 259 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 STOML2Q9UJZ1 356 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 AGO1Q9UL18 857 aaKnown RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 ZNF510Q9Y2H8 683 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 SH3BP1Q9Y3L3 701 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 KIF26AQ9ULI4 1882 aaPredicted RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 GOLGA6L7A0A1B0GV03 622 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 TCRBV7S2A1N4TA0A589 114 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CTAGE15A4D2H0 777 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 E9PAM4 449 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 KRIT1O00522 736 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 TM4SF5O14894 197 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 GREM1O60565 184 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CST8O60676 142 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CTAGE8P0CG41 777 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 TACR2P21452 398 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 AMPD1P23109 780 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 EPHB2P29323 1055 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 HOXC13P31276 330 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 GGCXP38435 758 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 LIMK1P53667 647 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 ADCY2Q08462 1091 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
C4A-244ENST00000460060 DPYSQ14117 519 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 MANEALQ5VSG8 457 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 RAP1GAP2Q684P5 730 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 SLC9A4Q6AI14 798 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 NADSYN1Q6IA69 706 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 RWDD4Q6NW29 188 aaKnown RBP13.11□□□□□ -0.31
C4A-244ENST00000460060 CEP68Q76N32 757 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CTAGE6Q86UF2 777 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CHSY1Q86X52 802 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CTAGE4Q8IX94 777 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 PQLC3Q8N755 202 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 TBC1D31Q96DN5 1066 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 OBP2AQ9NY56 170 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 CCL26Q9Y258 94 aa13.11□□□□□ -0.31
C4A-244ENST00000460060 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
C4A-244ENST00000460060 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 E2F8A0AVK6 867 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 DRGXA6NNA5 263 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 F5H5T6 163 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 APOL1O14791 398 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
C4A-244ENST00000460060 TCF3P15923 654 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 ERCC2P18074 760 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 DYNLT1P63172 113 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 CCINQ13939 588 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 PON2Q15165 354 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
C4A-244ENST00000460060 ARTNQ5T4W7 220 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 ADGRF1Q5T601 910 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 IL31Q6EBC2 164 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 Q6ZNB5 142 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 ZNF683Q8IZ20 524 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 SYNPOQ8N3V7 929 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 TTC16Q8NEE8 873 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 SPATA4Q8NEY3 305 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 TTC8Q8TAM2 541 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 AP1M1Q9BXS5 423 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 ZYG11BQ9C0D3 744 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 CATSPERBQ9H7T0 1116 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 ARHGEF4Q9NR80 690 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 HOMER3Q9NSC5 361 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 GTSE1Q9NYZ3 720 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 PPARGC1AQ9UBK2 798 aaKnown RBP13.1□□□□□ -0.31
C4A-244ENST00000460060 VANGL2Q9ULK5 521 aa13.1□□□□□ -0.31
C4A-244ENST00000460060 CCDC188H7C350 402 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 RIOK3O14730 519 aaKnown RBP13.09□□□□□ -0.31
C4A-244ENST00000460060 DCLK1O15075 740 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 AXIN1O15169 862 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 SLU7O95391 586 aaKnown RBP13.09□□□□□ -0.31
C4A-244ENST00000460060 PRAMEF12O95522 483 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 APOC2P02655 101 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 ZNF806P0C7X5 589 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 TGM2P21980 687 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 PMLP29590 882 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 SLC6A4P31645 630 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 SIX1Q15475 284 aaPredicted RBP13.09□□□□□ -0.31
C4A-244ENST00000460060 C5orf22Q49AR2 442 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 N4BP2L1Q5TBK1 243 aaPredicted RBP13.09□□□□□ -0.31
C4A-244ENST00000460060 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 PLD5Q8N7P1 536 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 IGSF8Q969P0 613 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 LOXL4Q96JB6 756 aa13.09□□□□□ -0.31
C4A-244ENST00000460060 RPRD1AQ96P16 312 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms