RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ZCCHC9Q8N567 271 aaKnown RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF366Q8N895 744 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 FRS2Q8WU20 508 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 OR8D1Q8WZ84 308 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 IGSF8Q969P0 613 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 BIRC7Q96CA5 298 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 CCDC114Q96M63 670 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 CNTNAP3BQ96NU0 1288 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 OMDQ99983 421 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 BPIFA3Q9BQP9 254 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 CNTNAP3Q9BZ76 1288 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 TKTL2Q9H0I9 626 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 VPS16Q9H269 839 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 C6orf106Q9H6K1 298 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 FANCLQ9NW38 375 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 EIF2B4Q9UI10 523 aaKnown RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 SLCO3A1Q9UIG8 710 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 VANGL2Q9ULK5 521 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 WASF3Q9UPY6 502 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 ARID1BQ8NFD5 2236 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 IGF2RP11717 2491 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 ANKRD11Q6UB99 2663 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 A0A1W2PPC4 97 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 ILVBLA1L0T0 632 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 TTC34A8MYJ7 566 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 C1QTNF3-AMACRE9PGA6 284 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 MCF2LO15068 1137 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 YKT6O15498 198 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 FLRT2O43155 660 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 ADCY5O95622 1261 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 CALB1P05937 261 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 MMEP08473 750 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 PNMA6AP0CW24 399 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 UNGP13051 313 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 MZF1P28698 734 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 GALCP54803 685 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 POLR2FP61218 127 aaKnown RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 FMO1Q01740 532 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 CENPCQ03188 943 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 OVGP1Q12889 678 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 NEK5Q6P3R8 708 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 MMS22LQ6ZRQ5 1243 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 FAM124AQ86V42 546 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 ZSCAN30Q86W11 494 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 PHF13Q86YI8 300 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 DHX40Q8IX18 779 aaKnown RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 SH2D3CQ8N5H7 860 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 DCAF4L2Q8NA75 395 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 DEFB124Q8NES8 71 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 TBCBQ99426 244 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 CDC6Q99741 560 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 MIR1-1HGQ9H1L0 117 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 OSBPL2Q9H1P3 480 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 TM9SF3Q9HD45 589 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 FAM207AQ9NSI2 230 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-228ENST00000459788 VPS28Q9UK41 221 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 NEUROG3Q9Y4Z2 214 aa10.28□□□□□ -0.76
HDLBP-228ENST00000459788 SYNJ2BP-COX16A0A087WUM0 186 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 VILLO15195 856 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 MID1O15344 667 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 LATO43561 262 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 PCDHGA12O60330 932 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 MAGEC1O60732 1142 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 RNGTTO60942 597 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 GFPT2O94808 682 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 IGHV4-34P06331 123 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 CHRNB2P17787 502 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 CDK11BP21127 795 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 MAOBP27338 520 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 SDC4P31431 198 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 FLT3P36888 993 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 CTSOP43234 321 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 NSFP46459 744 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 AIF1P55008 147 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 GEMIN4P57678 1058 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 RNASE9P60153 205 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 SYCP1Q15431 976 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 DLG2Q15700 870 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 INAVAQ3KP66 663 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 SLC45A4Q5BKX6 768 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 TAF3Q5VWG9 929 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 NAA35Q5VZE5 725 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 RETSATQ6NUM9 610 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 IQCHQ86VS3 1027 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 MMAAQ8IVH4 418 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 NAXDQ8IW45 347 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 STK40Q8N2I9 435 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 OXR1Q8N573 874 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 TMIEQ8NEW7 156 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 GANCQ8TET4 914 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 CPA5Q8WXQ8 436 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 CENPIQ92674 756 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 NTAN1Q96AB6 310 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 ERLEC1Q96DZ1 483 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 VCPIP1Q96JH7 1222 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 RPL10LQ96L21 214 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 ORAI3Q9BRQ5 295 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms