RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 RFPL2O75678 378 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SEC31AO94979 1220 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 VNN2O95498 520 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CPP00450 1065 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATP5BP06576 529 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 PECAM1P16284 738 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 PAMP19021 973 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 IL4RP24394 825 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 DNAJB1P25685 340 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 IRS1P35568 1242 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MMP13P45452 471 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MAPK8P45983 427 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CARSP49589 748 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 PAPOLAP51003 745 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 EPHA5P54756 1037 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 VSNL1P62760 191 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 GNA12Q03113 381 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 GBE1Q04446 702 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 GAD2Q05329 585 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 GALNT2Q10471 571 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SEMA3BQ13214 749 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 DMC1Q14565 340 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 GRM3Q14832 879 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 OASLQ15646 514 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ACCSLQ4AC99 568 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TEX44Q53QW1 395 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 RAB6CQ53S08 254 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM109BQ6ICB4 259 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANKRD54Q6NXT1 300 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TTC27Q6P3X3 843 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 RFWD3Q6PCD5 774 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TPGS1Q6ZTW0 290 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 GAREM2Q75VX8 874 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MTSS1LQ765P7 747 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TAOK1Q7L7X3 1001 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 OTOP3Q7RTS5 596 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 BHLHA9Q7RTU4 235 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ARID3BQ8IVW6 561 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CFAP52Q8N1V2 620 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MICALL1Q8N3F8 863 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CPA6Q8N4T0 437 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 PQLC3Q8N755 202 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZSCAN18Q8TBC5 510 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 BPIFB1Q8TDL5 484 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CSGALNACT1Q8TDX6 532 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SH3RF2Q8TEC5 729 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CASKIN2Q8WXE0 1202 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CDKL2Q92772 493 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATP2A3Q93084 1043 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ACDQ96AP0 544 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 LRRC39Q96DD0 335 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 P2RY11Q96G91 374 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CELF6Q96J87 481 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SPATA13Q96N96 652 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 AGAP3Q96P47 875 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TSGA13Q96PP4 275 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 RBM15Q96T37 977 aaKnown RBP eCLIP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 LGMNQ99538 433 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC46A2Q9BY10 475 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ADGRE3Q9BY15 652 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SLC2A11Q9BYW1 496 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 POLR1EQ9GZS1 481 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 RAB6CQ9H0N0 254 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CENPHQ9H3R5 247 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 LRRC40Q9H9A6 602 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 VIPAS39Q9H9C1 493 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 VPS37BQ9H9H4 285 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 PPCSQ9HAB8 311 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF334Q9HCZ1 680 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMPRSS4Q9NRS4 437 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ETNK2Q9NVF9 386 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 RBM22Q9NW64 420 aaKnown RBP eCLIP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 DUS2Q9NX74 493 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MTMR10Q9NXD2 777 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 CLDND1Q9NY35 253 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 OBP2AQ9NY56 170 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 UBA2Q9UBT2 640 aaPredicted RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 SEPT3Q9UH03 358 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 AGO1Q9UL18 857 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 PLA2G4CQ9UP65 541 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 R3HDM2Q9Y2K5 976 aaKnown RBP5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 MAD1L1Q9Y6D9 718 aa5.97□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANKRD36A6QL64 1941 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 IGLV3-10A0A075B6K4 115 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 A0A087WUV0 522 aaPredicted RBP5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 GOLGA6L7A0A1B0GV03 622 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 SDR42E2A6NKP2 422 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 NEDD8-MDP1E9PL57 170 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 FAM72CH0Y354 149 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 KCNK1O00180 336 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 TIMM44O43615 452 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 KDELR3O43731 214 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 MFSD11O43934 449 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 PPFIA2O75334 1257 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 MAP3K6O95382 1288 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 JCHAINP01591 159 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 POLBP06746 335 aa5.96□□□□□ -1.46
RNU1-88P-201ENST00000459274 SERPINF2P08697 491 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms