RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 C1QL1O75973 258 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 SMC2O95347 1197 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TRUB2O95900 331 aaKnown RBP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 CALCAP01258 141 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3HP0C7X1 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 VAV1P15498 845 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 METAP1P53582 386 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 SEMG2Q02383 582 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 C19orf57Q0VDD7 668 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 BNIP3Q12983 259 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 PROX2Q3B8N5 592 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 ZC3H12AQ5D1E8 599 aaKnown RBP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 AGBL4Q5VU57 503 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 FAM46CQ5VWP2 391 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3GQ6DHY5 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3CQ6IPX1 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 CXorf57Q6NSI4 855 aaKnown RBP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 LRRC69Q6ZNQ3 347 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TMEM110Q86TL2 294 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 PRPF39Q86UA1 669 aaKnown RBP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3Q8IZP1 549 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 CCAR2Q8N163 923 aaKnown RBP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 DCBLD1Q8N8Z6 715 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 OR8D1Q8WZ84 308 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 SLC39A7Q92504 469 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 ST7Q9NRC1 585 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 AK5Q9Y6K8 562 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 ZNF462Q96JM2 2506 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 E5RJQ4 531 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 PRAMEF26H0Y7S4 382 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 CAPN9O14815 690 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 RNGTTO60942 597 aaKnown RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 RTN2O75298 545 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 SLC2A3P11169 496 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 PDGFRAP16234 1089 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 PPP1R2P41236 205 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 YWHAZP63104 245 aaKnown RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 NUCB2P80303 420 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 INSM1Q01101 510 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 MTA1Q13330 715 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 ZNF211Q13398 564 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 STIM1Q13586 685 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 SETMARQ53H47 684 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 RABGAP1LQ5R372 815 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 RRAGAQ7L523 313 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 ARHGEF19Q8IW93 802 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 ATP6V0D2Q8N8Y2 350 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 TMEM145Q8NBT3 493 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 ERCC4Q92889 916 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 FGF11Q92914 225 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 SMARCE1Q969G3 411 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 ALG14Q96F25 216 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 DHTKD1Q96HY7 919 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 KREMEN1Q96MU8 473 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 FCRL3Q96P31 734 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-227ENST00000458564 MED15Q96RN5 788 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 PPP1R9BQ96SB3 815 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 THAP9Q9H5L6 903 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 PREBQ9HCU5 417 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 SARDHQ9UL12 918 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 PPM1HQ9ULR3 514 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 CLCA2Q9UQC9 943 aa10.74□□□□□ -0.69
HDLBP-227ENST00000458564 TEX51A0A1B0GUA7 166 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 C1QTNF3-AMACRE9PGA6 284 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 MCF2LO15068 1137 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 MED7O43513 233 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 BRINP1O60477 761 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 PRB1P04280 392 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 GLI1P08151 1106 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 GLDCP23378 1020 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 CCR1P32246 355 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 ACTN2P35609 894 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 MARSP56192 900 aaKnown RBP10.73□□□□□ -0.69
HDLBP-227ENST00000458564 PITX1P78337 314 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-227ENST00000458564 E2F1Q01094 437 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 TLE3Q04726 772 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 CNTN1Q12860 1018 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 PDCLQ13371 301 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 STAT4Q14765 748 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D25Q3MII6 688 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 CCDC40Q4G0X9 1142 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 TTI2Q6NXR4 508 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 DENND1BQ6P3S1 775 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 ERICH1Q86X53 443 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 CIR1Q86X95 450 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-227ENST00000458564 TRIM59Q8IWR1 403 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 TIGD1Q96MW7 591 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 SLC2A13Q96QE2 648 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 FEM1AQ9BSK4 669 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 ASNSD1Q9NWL6 643 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 SLC12A6Q9UHW9 1150 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 OR51B4Q9Y5P0 310 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 RAI2Q9Y5P3 530 aa10.73□□□□□ -0.69
HDLBP-227ENST00000458564 TRIM38O00635 465 aa10.72□□□□□ -0.69
HDLBP-227ENST00000458564 SIGLEC6O43699 453 aa10.72□□□□□ -0.69
HDLBP-227ENST00000458564 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
HDLBP-227ENST00000458564 MAT2AP31153 395 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms