RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 GPR152Q8TDT2 470 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 POF1BQ8WVV4 589 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 UBLCP1Q8WVY7 318 aaPredicted RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 SLC39A13Q96H72 371 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 FCRL2Q96LA5 508 aaPredicted RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 TTC25Q96NG3 672 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 OLFM3Q96PB7 478 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 PPP1R2P1Q96PQ5 205 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 VAT1Q99536 393 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 CDCA3Q99618 268 aaPredicted RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 TCF25Q9BQ70 676 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 HINFPQ9BQA5 517 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 DTLQ9NZJ0 730 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 SAE1Q9UBE0 346 aaPredicted RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 PCDHB3Q9Y5E6 796 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 GOLGA6CA6NDK9 693 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 ZNF840PA6NDX5 716 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 C5orf60A6NFR6 353 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 WASH4PA8MWX3 477 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 E9PAM4 449 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 CHADO15335 359 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 EIF3HO15372 352 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS50-207ENST00000458530 OPHN1O60890 802 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 GCATO75600 419 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 LATS1O95835 1130 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 CNPP09543 421 aaKnown RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 FAM153BP0C7A2 387 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 GOLGA6DP0CG33 693 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 HMGA1P17096 107 aaKnown RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 IVDP26440 423 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 CDC25CP30307 473 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 FDFT1P37268 417 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 PMS2P54278 862 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 ARL4CP56559 192 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 BASP1P80723 227 aaKnown RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 SARNPP82979 210 aaKnown RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 GBE1Q04446 702 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 PRKD1Q15139 912 aaPredicted RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 FAM153CQ494X1 144 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 MIA3Q5JRA6 1907 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 MANEALQ5VSG8 457 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 DENND2CQ68D51 928 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 TIGD7Q6NT04 549 aaPredicted RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 HIBCHQ6NVY1 386 aaPredicted RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 SYCE2Q6PIF2 218 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 CENPUQ71F23 418 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 MIB1Q86YT6 1006 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 UBALD2Q8IYN6 164 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 LEMD2Q8NC56 503 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 CCNYQ8ND76 341 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 HTR3CQ8WXA8 447 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 AUTS2Q8WXX7 1259 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 MRPS31Q92665 395 aaKnown RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 AZIN2Q96A70 460 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 HDAC11Q96DB2 347 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 KLHL5Q96PQ7 755 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 ZYG11BQ9C0D3 744 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 SIK2Q9H0K1 926 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 HAUS2Q9NVX0 235 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 OSER1Q9NX31 292 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 GOLGA6AQ9NYA3 693 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 PPARGC1AQ9UBK2 798 aaKnown RBP9.18□□□□□ -0.94
VPS50-207ENST00000458530 FAM153AQ9UHL3 310 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
VPS50-207ENST00000458530 GPR179Q6PRD1 2367 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 CHD5Q8TDI0 1954 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 NYNRINQ9P2P1 1898 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 A0A0A0MRY4 1105 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 TYW5A2RUC4 315 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 F5H5T6 163 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 TGM5O43548 720 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 C8AP07357 584 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 IVLP07476 585 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 SRGAP2BP0DMP2 458 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 RHOQP17081 205 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 RBL1P28749 1068 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 HOXA9P31269 272 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 RPL22P35268 128 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 MLLT6P55198 1093 aaPredicted RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 CDK16Q00536 496 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 PPIDQ08752 370 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 IFFO1Q0D2I5 559 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 GALNT2Q10471 571 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 AP1B1Q10567 949 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 TRADDQ15628 312 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 HIF1AQ16665 826 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 ANO4Q32M45 955 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 RABGAP1LQ5R372 815 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 PPM1LQ5SGD2 360 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 RNASEH2BQ5TBB1 312 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 TTC39BQ5VTQ0 682 aaPredicted RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 PLPP4Q5VZY2 271 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 ITPRIPL1Q6GPH6 555 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 ANKRD54Q6NXT1 300 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 RHBDF2Q6PJF5 856 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 DNAJB7Q7Z6W7 309 aaPredicted RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 RBM23Q86U06 439 aaKnown RBP9.17□□□□□ -0.94
VPS50-207ENST00000458530 CCDC25Q86WR0 208 aa9.17□□□□□ -0.94
VPS50-207ENST00000458530 CHSY1Q86X52 802 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms