RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CTNND2Q9UQB3 1225 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 PDGFRAP16234 1089 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 PDCLQ13371 301 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 CCDC157Q569K6 752 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 NAPEPLDQ6IQ20 393 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 GATAD2AQ86YP4 633 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 FRS2Q8WU20 508 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 HNRNPLLQ8WVV9 542 aaKnown RBP22.18■■□□□ 1.14
CPNE1-220ENST00000458038 OR8D1Q8WZ84 308 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 RNF34Q969K3 372 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 CNDP2Q96KP4 475 aaKnown RBP22.18■■□□□ 1.14
CPNE1-220ENST00000458038 NOX5Q96PH1 765 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 FAM204AQ9H8W3 233 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 SLC25A13Q9UJS0 675 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 DMTF1Q9Y222 760 aa22.18■■□□□ 1.14
CPNE1-220ENST00000458038 A0A087WV48 116 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 ALOX15BO15296 676 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 ATP9BO43861 1147 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 HSF2BPO75031 334 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 RFPL3O75679 317 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 DRD3P35462 400 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 STK19P49842 368 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-220ENST00000458038 NXPH1P58417 271 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 PRAMEF14Q5SWL7 426 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-220ENST00000458038 SLC2A13Q96QE2 648 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 TMEM51Q9NW97 253 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 DDIT4Q9NX09 232 aa22.17■■□□□ 1.14
CPNE1-220ENST00000458038 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-220ENST00000458038 FAM149AA5PLN7 773 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 JUPP14923 745 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 EPHA8P29322 1005 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-220ENST00000458038 STX17P56962 302 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 CCDC15Q0P6D6 951 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 ZNF177Q13360 481 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-220ENST00000458038 ILKQ13418 452 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 SHBQ15464 509 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 TRIM65Q6PJ69 517 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 PPP1R13BQ96KQ4 1090 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 RPRD1AQ96P16 312 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-220ENST00000458038 FEM1AQ9BSK4 669 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 PCDHGC3Q9UN70 934 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 DOCK9Q9BZ29 2069 aa22.16■■□□□ 1.14
CPNE1-220ENST00000458038 C1QTNF3-AMACRE9PGA6 284 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 MCF2LO15068 1137 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 PLRG1O43660 514 aaKnown RBP22.15■■□□□ 1.14
CPNE1-220ENST00000458038 CLDN11O75508 207 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 ACCSLQ4AC99 568 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 C6orf118Q5T5N4 469 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 CXorf57Q6NSI4 855 aaKnown RBP22.15■■□□□ 1.14
CPNE1-220ENST00000458038 FBXL22Q6P050 247 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 TRIM69Q86WT6 500 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 MARCH9Q86YJ5 346 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 DEFB106AQ8N104 65 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 NXPE2Q96DL1 559 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 ALG14Q96F25 216 aa22.15■■□□□ 1.14
CPNE1-220ENST00000458038 FARP1Q9Y4F1 1045 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-220ENST00000458038 BIN1O00499 593 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 WNT9AO14904 365 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 RNGTTO60942 597 aaKnown RBP22.14■■□□□ 1.13
CPNE1-220ENST00000458038 PITX1P78337 314 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-220ENST00000458038 AUHQ13825 339 aaKnown RBP22.14■■□□□ 1.13
CPNE1-220ENST00000458038 STAT4Q14765 748 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 TAF5Q15542 800 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 SOWAHCQ53LP3 525 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-220ENST00000458038 C11orf57Q6ZUT1 292 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-220ENST00000458038 EID2Q8N6I1 236 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 TSC1Q92574 1164 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 CPXM1Q96SM3 734 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 RRN3Q9NYV6 651 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 ARHGAP20Q9P2F6 1191 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 APEX2Q9UBZ4 518 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 PPM1HQ9ULR3 514 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 MYLKQ15746 1914 aa22.14■■□□□ 1.13
CPNE1-220ENST00000458038 GTPBP10A4D1E9 387 aaKnown RBP22.13■■□□□ 1.13
CPNE1-220ENST00000458038 VAV1P15498 845 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 USP8P40818 1118 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 ACADVLP49748 655 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 PPP2CBP62714 309 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 PPP2CAP67775 309 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 PTK2Q05397 1052 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 DLG2Q15700 870 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 SETMARQ53H47 684 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-220ENST00000458038 ACBD5Q5T8D3 534 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-220ENST00000458038 SFMBT2Q5VUG0 894 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 GBP6Q6ZN66 633 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 CIR1Q86X95 450 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-220ENST00000458038 CACTIN-AS1Q8N1I8 211 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 WDTC1Q8N5D0 677 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 SHC3Q92529 594 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 LRIG1Q96JA1 1093 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 CCDC114Q96M63 670 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 CRACR2AQ9BSW2 395 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 PREBQ9HCU5 417 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 VPS28Q9UK41 221 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 TBC1D30Q9Y2I9 924 aa22.13■■□□□ 1.13
CPNE1-220ENST00000458038 BECN2A8MW95 431 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 PRAMEF26H0Y7S4 382 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 RTN2O75298 545 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 ZNF18P17022 549 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms