RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CCP110O43303 1012 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 GYPCP04921 128 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 PLEKP08567 350 aaPredicted RBP23.79■■□□□ 1.4
CBX3-204ENST00000456948 TGM1P22735 817 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 PSMA2P25787 234 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 CASP14P31944 242 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 HOXD12P35452 270 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 CTSOP43234 321 aaPredicted RBP23.79■■□□□ 1.4
CBX3-204ENST00000456948 AASDHQ4L235 1098 aaPredicted RBP23.79■■□□□ 1.4
CBX3-204ENST00000456948 DSG4Q86SJ6 1040 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 SYT12Q8IV01 421 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 FRMD1Q8N878 549 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 TOE1Q96GM8 510 aaKnown RBP23.79■■□□□ 1.4
CBX3-204ENST00000456948 ISCUQ9H1K1 167 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 TMPRSS4Q9NRS4 437 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 SLCO3A1Q9UIG8 710 aa23.79■■□□□ 1.4
CBX3-204ENST00000456948 FARP1Q9Y4F1 1045 aaPredicted RBP23.79■■□□□ 1.4
CBX3-204ENST00000456948 ZNF33AQ06730 810 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 SCAPQ12770 1279 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 WDR45BQ5MNZ6 344 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 PLA2G2CQ5R387 149 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 RETSATQ6NUM9 610 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 CADM4Q8NFZ8 388 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 OR8K1Q8NGG5 319 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 CEP76Q8TAP6 659 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 GANCQ8TET4 914 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 FNIP1Q8TF40 1166 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 TBC1D31Q96DN5 1066 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 MYO19Q96H55 970 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 CCDC114Q96M63 670 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 EPAS1Q99814 870 aa23.78■■□□□ 1.4
CBX3-204ENST00000456948 RSPH9Q9H1X1 276 aaPredicted RBP23.78■■□□□ 1.4
CBX3-204ENST00000456948 WSB2Q9NYS7 404 aaPredicted RBP23.78■■□□□ 1.4
CBX3-204ENST00000456948 CDV3Q9UKY7 258 aaKnown RBP23.78■■□□□ 1.4
CBX3-204ENST00000456948 TTC34A8MYJ7 566 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 SIN3BO75182 1162 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 IGLV3-19P01714 112 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 RHOQP17081 205 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 L1CAMP32004 1257 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 MAPKAPK2P49137 400 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 IRAK1P51617 712 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 RPS14P62263 151 aaKnown RBP23.77■■□□□ 1.4
CBX3-204ENST00000456948 SLC20A2Q08357 652 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 HGSNATQ68CP4 663 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 ARMCX6Q7L4S7 300 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 CACUL1Q86Y37 369 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 CCDC185Q8N715 623 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 DCAF4L2Q8NA75 395 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 ALG14Q96F25 216 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 SPON2Q9BUD6 331 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 PCED1AQ9H1Q7 454 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 MYO1AQ9UBC5 1043 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 HPCAL4Q9UM19 191 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 GON4LQ3T8J9 2241 aa23.77■■□□□ 1.4
CBX3-204ENST00000456948 TMEM191CA6NGB0 347 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 EIF3CLB5ME19 914 aaKnown RBP23.76■■□□□ 1.39
CBX3-204ENST00000456948 C7P10643 843 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 GNSP15586 552 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 ELAVL3Q14576 367 aaKnown RBP23.76■■□□□ 1.39
CBX3-204ENST00000456948 PUM1Q14671 1186 aaKnown RBP eCLIP23.76■■□□□ 1.398e-23■□□□□ 9.7
CBX3-204ENST00000456948 C9orf64Q5T6V5 341 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 RGL4Q8IZJ4 473 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 ATP11CQ8NB49 1132 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 NETO1Q8TDF5 533 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 ZNF419Q96HQ0 510 aaPredicted RBP23.76■■□□□ 1.39
CBX3-204ENST00000456948 EIF3CQ99613 913 aaKnown RBP23.76■■□□□ 1.39
CBX3-204ENST00000456948 GPR174Q9BXC1 333 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 BTBD1Q9H0C5 482 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 DEF6Q9H4E7 631 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 CATSPERBQ9H7T0 1116 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 SUSD2Q9UGT4 822 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 OR51B4Q9Y5P0 310 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.76■■□□□ 1.39
CBX3-204ENST00000456948 NUP205Q92621 2012 aa23.76■■□□□ 1.39
CBX3-204ENST00000456948 ATP9BO43861 1147 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 LRIG2O94898 1065 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 ADH1BP00325 375 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 HNRNPH3P31942 346 aaKnown RBP23.75■■□□□ 1.39
CBX3-204ENST00000456948 HTR7P34969 479 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 PTGER3P43115 390 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 STK19P49842 368 aaPredicted RBP23.75■■□□□ 1.39
CBX3-204ENST00000456948 CLCN6P51797 869 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 GEMIN4P57678 1058 aaKnown RBP23.75■■□□□ 1.39
CBX3-204ENST00000456948 ACAP1Q15027 740 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 CCDC6Q16204 474 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 FAM46CQ5VWP2 391 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 USP30Q70CQ3 517 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 DGLUCYQ7Z3D6 616 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 VSTM4Q8IW00 320 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 DEFB119Q8N690 84 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 OR8D1Q8WZ84 308 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 HSPA12BQ96MM6 686 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 OMDQ99983 421 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 NUSAP1Q9BXS6 441 aaKnown RBP23.75■■□□□ 1.39
CBX3-204ENST00000456948 SGK2Q9HBY8 427 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 ATP13A1Q9HD20 1204 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 HS3ST2Q9Y278 367 aa23.75■■□□□ 1.39
CBX3-204ENST00000456948 DOCK4Q8N1I0 1966 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 DCHS1Q96JQ0 3298 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms