RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 DESP17661 470 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 AIF1P55008 147 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 OGDHQ02218 1023 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 HNRNPA1L2Q32P51 320 aaKnown RBP17.82■□□□□ 0.44
USP39-208ENST00000455732 C6orf118Q5T5N4 469 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 PEAR1Q5VY43 1037 aaPredicted RBP17.82■□□□□ 0.44
USP39-208ENST00000455732 KIAA1324Q6UXG2 1013 aaKnown RBP17.82■□□□□ 0.44
USP39-208ENST00000455732 ARMCX6Q7L4S7 300 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 CCDC185Q8N715 623 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 OR52K2Q8NGK3 314 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 DNAJC7Q99615 494 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 FEM1AQ9BSK4 669 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 ZYG11BQ9C0D3 744 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 ITM2CQ9NQX7 267 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 TMEM74BQ9NUR3 256 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 ARHGAP20Q9P2F6 1191 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 CNOT8Q9UFF9 292 aaKnown RBP17.82■□□□□ 0.44
USP39-208ENST00000455732 OR12D3Q9UGF7 316 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 SCINQ9Y6U3 715 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 TMEM191CA6NGB0 347 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 PATE3B3GLJ2 98 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 IGLV3-19P01714 112 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 PLEKP08567 350 aaPredicted RBP17.81■□□□□ 0.44
USP39-208ENST00000455732 CTSOP43234 321 aaPredicted RBP17.81■□□□□ 0.44
USP39-208ENST00000455732 RNF219Q5W0B1 726 aaPredicted RBP17.81■□□□□ 0.44
USP39-208ENST00000455732 LYSMD4Q5XG99 296 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 ZNF783Q6ZMS7 281 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 TMC6Q7Z403 805 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 SYT12Q8IV01 421 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 SLC41A1Q8IVJ1 513 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 ZNF366Q8N895 744 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 PIGKQ92643 395 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 ZNF653Q96CK0 615 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 SIPA1Q96FS4 1042 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 PRSS16Q9NQE7 514 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 MPP6Q9NZW5 540 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 PILRBQ9UKJ0 227 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 NEU3Q9UQ49 428 aa17.81■□□□□ 0.44
USP39-208ENST00000455732 PCDH15Q96QU1 1955 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 LNP1A1A4G5 178 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 DCDC2BA2VCK2 349 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 TM4SF5O14894 197 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 SRGAP2O75044 1071 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 RHOCP08134 193 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 ITPKAP23677 461 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 TPMTP51580 245 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 ZBTB16Q05516 673 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 ZNF33AQ06730 810 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 STPG1Q5TH74 334 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 TFAP2DQ7Z6R9 452 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 SLFN11Q7Z7L1 901 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 DNAAF5Q86Y56 855 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 DEFB119Q8N690 84 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 OR8K1Q8NGG5 319 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 PRCCQ92733 491 aaPredicted RBP17.8■□□□□ 0.44
USP39-208ENST00000455732 ZNF419Q96HQ0 510 aaPredicted RBP17.8■□□□□ 0.44
USP39-208ENST00000455732 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.8■□□□□ 0.44
USP39-208ENST00000455732 MRPL47Q9HD33 250 aaKnown RBP17.8■□□□□ 0.44
USP39-208ENST00000455732 WSB2Q9NYS7 404 aaPredicted RBP17.8■□□□□ 0.44
USP39-208ENST00000455732 EVLQ9UI08 416 aaPredicted RBP17.8■□□□□ 0.44
USP39-208ENST00000455732 VPS28Q9UK41 221 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 NENFQ9UMX5 172 aa17.8■□□□□ 0.44
USP39-208ENST00000455732 A0A087X0T9 212 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 EDDM13A0A1B0GTR0 161 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 ILVBLA1L0T0 632 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 TARSL2A2RTX5 802 aaKnown RBP17.79■□□□□ 0.44
USP39-208ENST00000455732 FAM72CH0Y354 149 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 KHNYNO15037 678 aaKnown RBP17.79■□□□□ 0.44
USP39-208ENST00000455732 TPM1P09493 284 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 FAM228BP0C875 321 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 PSMA2P25787 234 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 CD6P30203 668 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 HOXD12P35452 270 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 NNMTP40261 264 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 DPP6P42658 865 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 IRX4P78413 519 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 ZNF252P-AS1Q0IIN9 211 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 EFHC2Q5JST6 749 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 FAM72AQ5TYM5 149 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 FAM72DQ6L9T8 149 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 NLRP14Q86W24 1093 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 FAM72BQ86X60 149 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 DCAF4L2Q8NA75 395 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 TBC1D31Q96DN5 1066 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 TOE1Q96GM8 510 aaKnown RBP17.79■□□□□ 0.44
USP39-208ENST00000455732 PSMB7Q99436 277 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 EDEM2Q9BV94 578 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 C2orf49Q9BVC5 232 aaPredicted RBP17.79■□□□□ 0.44
USP39-208ENST00000455732 MUC3BQ9H195 1237 aa17.79■□□□□ 0.44
USP39-208ENST00000455732 ATXN2Q99700 1313 aaKnown RBP17.78■□□□□ 0.44
USP39-208ENST00000455732 ATP9BO43861 1147 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 MFAP3LO75121 409 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 LRIG2O94898 1065 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 RHOQP17081 205 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 OXTRP30559 389 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 OR1E1P30953 314 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 L1CAMP32004 1257 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 MAPKAPK2P49137 400 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 STK19P49842 368 aaPredicted RBP17.78■□□□□ 0.44
USP39-208ENST00000455732 C9orf64Q5T6V5 341 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms