RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TRIP6Q15654 476 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 ZBTB6Q15916 424 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ZNF568Q3ZCX4 644 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 HS1BP3Q53T59 392 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 FIGNQ5HY92 759 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 EARS2Q5JPH6 523 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 ATF7IP2Q5U623 682 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 BTBD8Q5XKL5 378 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 USP51Q70EK9 711 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 MAEAQ7L5Y9 396 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 MAMDC2Q7Z304 686 aaPredicted RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 ITIH5Q86UX2 942 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 LSM14AQ8ND56 463 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 TSTD1Q8NFU3 115 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 CCDC26Q8TAB7 109 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 MDM1Q8TC05 714 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 USP13Q92995 863 aaPredicted RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 CD101Q93033 1021 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 C18orf25Q96B23 403 aaPredicted RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 LRIG1Q96JA1 1093 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 AIFM3Q96NN9 605 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 PGLYRP2Q96PD5 576 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 MTMR9Q96QG7 549 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 NAP1L4Q99733 375 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 ACO2Q99798 780 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 TPSD1Q9BZJ3 242 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 CDT1Q9H211 546 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ECT2Q9H8V3 914 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 KIF9Q9HAQ2 790 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 NCOA5Q9HCD5 579 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 MMP17Q9ULZ9 603 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 PCDHA12Q9UN75 941 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ZFR2Q9UPR6 939 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 APC2O95996 2303 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ZNF462Q96JM2 2506 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 MYH9P35579 1960 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 EIF4E1BA6NMX2 242 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 FAM90A27PA6NNH2 459 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 K7ERI5 159 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 SH3BP5O60239 455 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 MARCH6O60337 910 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 OPHN1O60890 802 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 SOAT2O75908 522 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 BAG4O95429 457 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 PRB1P04280 392 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 SERPINF2P08697 491 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 FTH1P19P0C7X4 201 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 MCF2P10911 925 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 PLA2G2AP14555 144 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 HMGA1P17096 107 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 ATP2B1P20020 1258 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 CYP3A5P20815 502 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 DDX6P26196 483 aaKnown RBP eCLIP3.97□□□□□ -1.77
RBM39-220ENST00000455343 U2AF2P26368 475 aaKnown RBP eCLIP3.97□□□□□ -1.776e-13■■□□□ 14.4
RBM39-220ENST00000455343 MARCKSP29966 332 aaPredicted RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 AVPR1AP37288 418 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 OPRD1P41143 372 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 ETV4P43268 484 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 TUFMP49411 452 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 CCT2P78371 535 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 MRPS21P82921 87 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 SSRP1Q08945 709 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 PRKD1Q15139 912 aaPredicted RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 PPP2R5AQ15172 486 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 GPR19Q15760 415 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 DUOXA1Q1HG43 343 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 ARHGAP15Q53QZ3 475 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 ANO7Q6IWH7 933 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 PIK3AP1Q6ZUJ8 805 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 TOGARAM2Q6ZUX3 1019 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 SPATC1Q76KD6 591 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 LPCAT2Q7L5N7 544 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 MTDHQ86UE4 582 aaKnown RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 TAX1BP1Q86VP1 789 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 MON1AQ86VX9 555 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 CATSPER3Q86XQ3 398 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 NLGN4XQ8N0W4 816 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 HDDC3Q8N4P3 179 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 MINDY1Q8N5J2 469 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 FRMD1Q8N878 549 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 CEP76Q8TAP6 659 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 DEPTORQ8TB45 409 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 OSCP1Q8WVF1 389 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 RLN3Q8WXF3 142 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 EXOC4Q96A65 974 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 ACAP3Q96P50 834 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 KIFC3Q9BVG8 833 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 CCDC94Q9BW85 323 aaPredicted RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 TRIM55Q9BYV6 548 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 PCED1AQ9H1Q7 454 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 TTC12Q9H892 705 aaPredicted RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 FSCN3Q9NQT6 498 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 TDP1Q9NUW8 608 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 RIC8BQ9NVN3 520 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 NAP1L2Q9ULW6 460 aaPredicted RBP3.97□□□□□ -1.77
RBM39-220ENST00000455343 KCNJ14Q9UNX9 436 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 RAI2Q9Y5P3 530 aa3.97□□□□□ -1.77
RBM39-220ENST00000455343 VWA8A3KMH1 1905 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms