RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ACADVLP49748 655 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 SNX16P57768 344 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 NXPH1P58417 271 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 E2F1Q01094 437 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 RTP5Q14D33 572 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 CCDC40Q4G0X9 1142 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 SETMARQ53H47 684 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 DCAF6Q58WW2 860 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 RABGAP1LQ5R372 815 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 HES3Q5TGS1 186 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 ANKRD40Q6AI12 368 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3GQ6DHY5 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3CQ6IPX1 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 FOXR2Q6PJQ5 311 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 CHSY1Q86X52 802 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 GATAD2AQ86YP4 633 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3Q8IZP1 549 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 LGI2Q8N0V4 545 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 EID2Q8N6I1 236 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 OR8D1Q8WZ84 308 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TSC1Q92574 1164 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 SMARCE1Q969G3 411 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC39A13Q96H72 371 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 MIS12Q9H081 205 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 ZMYND15Q9H091 742 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 NUCKS1Q9H1E3 243 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 POPDC2Q9HBU9 364 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 ST7Q9NRC1 585 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TMEM51Q9NW97 253 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 SERGEFQ9UGK8 458 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC25A13Q9UJS0 675 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 INTS6Q9UL03 887 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 WDFY3Q8IZQ1 3526 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 ITPR1Q14643 2758 aa8.27□□□□□ -1.08
NIF3L1-209ENST00000454952 A0A1B0GVM2 712 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 BICDL2A1A5D9 508 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 TCAF2A6NFQ2 919 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 C10orf142B7Z368 130 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PRAMEF26H0Y7S4 382 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PIK3R2O00459 728 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 GNA14O95837 355 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 MOCS2O96007 188 aaPredicted RBP8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 WNT1P04628 370 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 TACR2P21452 398 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 EIF2S3P41091 472 aaKnown RBP8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PLK1P53350 603 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 YWHAZP63104 245 aaKnown RBP8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 TARDBPQ13148 414 aaKnown RBP eCLIP8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PNOCQ13519 176 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 KCNJ12Q14500 433 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 STAT4Q14765 748 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 SFMBT2Q5VUG0 894 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 ENOSF1Q7L5Y1 443 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 TAC4Q86UU9 113 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 TRIM69Q86WT6 500 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 CFAP52Q8N1V2 620 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 STK40Q8N2I9 435 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 AADATQ8N5Z0 425 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 FAM174AQ8TBP5 190 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 RFFLQ8WZ73 363 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 ERCC4Q92889 916 aaPredicted RBP8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 FGF11Q92914 225 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PTPRN2Q92932 1015 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 RNF34Q969K3 372 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 FAM131CQ96AQ9 280 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 CCDC114Q96M63 670 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 FAM129BQ96TA1 746 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 GOLPH3LQ9H4A5 285 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 MTG2Q9H4K7 406 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 THAP9Q9H5L6 903 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PREBQ9HCU5 417 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 CYTH4Q9UIA0 394 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 SLCO3A1Q9UIG8 710 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 NAALADL1Q9UQQ1 740 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 VPS9D1Q9Y2B5 631 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 PTPRQQ9UMZ3 2332 aa8.27□□□□□ -1.09
NIF3L1-209ENST00000454952 TEX51A0A1B0GUA7 166 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 KCNU1A8MYU2 1149 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 RNF225M0QZC1 329 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 PLRG1O43660 514 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 FGFR1OPO95684 399 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 TRUB2O95900 331 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 FYNP06241 537 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 GLI1P08151 1106 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 KRT5P13647 590 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF18P17022 549 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 ACP1P24666 158 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 CCR1P32246 355 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 CTSOP43234 321 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 GPD2P43304 727 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 CDK17Q00537 523 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 SEMG2Q02383 582 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 DNAJC3Q13217 504 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF211Q13398 564 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 SHBQ15464 509 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms