RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TMEM110Q86TL2 294 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 ZNF606Q8WXB4 792 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 CNTN6Q9UQ52 1028 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 PLXNA2O75051 1894 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 SYNJ2BP-COX16A0A087WUM0 186 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 LATO43561 262 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 VAV1P15498 845 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 GNA15P30679 374 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 MAT2AP31153 395 aaKnown RBP24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 CCR1P32246 355 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 PPP2CBP62714 309 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 PPP2CAP67775 309 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 ILKQ13418 452 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 HES3Q5TGS1 186 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 CIR1Q86X95 450 aaPredicted RBP24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 PIP4K2CQ8TBX8 421 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 RPRD1AQ96P16 312 aaPredicted RBP24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 DDIT4Q9NX09 232 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 COX16Q9P0S2 106 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 CYTH4Q9UIA0 394 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 DMTF1Q9Y222 760 aa24.45■■□□□ 1.5
LYSMD2-202ENST00000454181 C1QTNF3-AMACRE9PGA6 284 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 RRP8O43159 456 aaKnown RBP24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 RTN2O75298 545 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 IGLV3-25P01717 112 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 DRD3P35462 400 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 PLK1P53350 603 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 CLDN6P56747 220 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 OVGP1Q12889 678 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 ENOSF1Q7L5Y1 443 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 IQCHQ86VS3 1027 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 TRIM59Q8IWR1 403 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 CTNND2Q9UQB3 1225 aa24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 COL5A1P20908 1838 aaPredicted RBP24.44■■□□□ 1.5
LYSMD2-202ENST00000454181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 CKMT2P17540 419 aa24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 USP8P40818 1118 aa24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 MTA1Q13330 715 aa24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 ZNF177Q13360 481 aaPredicted RBP24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 SETMARQ53H47 684 aaPredicted RBP24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 FOXR2Q6PJQ5 311 aa24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 FRS2Q8WU20 508 aa24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 TSC1Q92574 1164 aa24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 BBC3Q96PG8 261 aaPredicted RBP24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 PRMT1Q99873 361 aaKnown RBP24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 FARP1Q9Y4F1 1045 aaPredicted RBP24.43■■□□□ 1.5
LYSMD2-202ENST00000454181 CELSR3Q9NYQ7 3312 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 C10orf142B7Z368 130 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 PPP1R3GB7ZBB8 358 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 PLRG1O43660 514 aaKnown RBP24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 BNIP3LO60238 219 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 FGFR1OPO95684 399 aaKnown RBP24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 STX17P56962 302 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 PITX1P78337 314 aaPredicted RBP24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 PDCLQ13371 301 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 TAF5Q15542 800 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 POM121L1PQ3SYA9 428 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 HS1BP3Q53T59 392 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 EFHC1Q5JVL4 640 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 FBXL22Q6P050 247 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 FBXL19Q6PCT2 694 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 SPATS2Q86XZ4 545 aaKnown RBP24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 DEFB106AQ8N104 65 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 BAP1Q92560 729 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 CRELD1Q96HD1 420 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 FAM81BQ96LP2 452 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 UBL7Q96S82 380 aaPredicted RBP24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 NRSN2Q9GZP1 204 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 ARHGAP20Q9P2F6 1191 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 VPS28Q9UK41 221 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 ASXL3Q9C0F0 2248 aa24.42■■□□□ 1.5
LYSMD2-202ENST00000454181 PRAMEF26H0Y7S4 382 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 ATP9BO43861 1147 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 GLI1P08151 1106 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 CCDC15Q0P6D6 951 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 CNTN1Q12860 1018 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 DLG2Q15700 870 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 TRIM69Q86WT6 500 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 ELOA2Q8IYF1 753 aaPredicted RBP24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 KLHDC7BQ96G42 594 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 NOX5Q96PH1 765 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 FEM1AQ9BSK4 669 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 SRRTQ9BXP5 876 aaKnown RBP24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 SARDHQ9UL12 918 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 VANGL2Q9ULK5 521 aa24.41■■□□□ 1.5
LYSMD2-202ENST00000454181 MCF2LO15068 1137 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 ALOX15BO15296 676 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 HSF2BPO75031 334 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 EIF2S3P41091 472 aaKnown RBP24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 VASPP50552 380 aaPredicted RBP24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 METAP1P53582 386 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 SNX16P57768 344 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 PAK1Q13153 545 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 NME3Q13232 169 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 AUHQ13825 339 aaKnown RBP24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 SFMBT2Q5VUG0 894 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 CXorf57Q6NSI4 855 aaKnown RBP24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 CREBRFQ8IUR6 639 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 PPP1R13BQ96KQ4 1090 aa24.4■■□□□ 1.5
LYSMD2-202ENST00000454181 PPM1HQ9ULR3 514 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms