RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ALG14Q96F25 216 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 CSPG4P5Q96PW8 444 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 C2orf49Q9BVC5 232 aaPredicted RBP14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 MAK16Q9BXY0 300 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 KCNF1Q9H3M0 494 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 GOLPH3Q9H4A6 298 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 ATP13A1Q9HD20 1204 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 NDFIP2Q9NV92 336 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 SLC25A13Q9UJS0 675 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 MMP17Q9ULZ9 603 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 ERVW-1Q9UQF0 538 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 OR51B4Q9Y5P0 310 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 STON1Q9Y6Q2 735 aa14.98□□□□□ -0.01
NCKIPSD-207ENST00000453349 A0A0D9SEW6 157 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 LRRD1A4D1F6 860 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 GRID2IPA4D2P6 1211 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 KRT1P04264 644 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 AMPD1P23109 780 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 WASP42768 502 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 NDST2P52849 883 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 MMRN1Q13201 1228 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 DPYSQ14117 519 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 DPYSL3Q14195 570 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 ANKRD20A8PQ5CZ79 823 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 PKN3Q6P5Z2 889 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 TMCO3Q6UWJ1 677 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 SERPINA13PQ6UXR4 307 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 PEX26Q7Z412 305 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 RCOR2Q8IZ40 523 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 UMODL1-AS1Q8N2C9 162 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 UBE2Q2Q8WVN8 375 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 ARHGEF2Q92974 986 aaKnown RBP14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 ACOX2Q99424 681 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 ZNF670Q9BS34 389 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 POLMQ9NP87 494 aaPredicted RBP14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 ZDHHC4Q9NPG8 344 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 KLHL11Q9NVR0 708 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 SUN2Q9UH99 717 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 HCN2Q9UL51 889 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 TECTAO75443 2155 aa14.97□□□□□ -0.01
NCKIPSD-207ENST00000453349 CCDC66A2RUB6 948 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 ARHGAP42A6NI28 874 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 WASH3PC4AMC7 463 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 SGK1O00141 431 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 CBX4O00257 560 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 ZBTB24O43167 697 aaPredicted RBP14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 SYNCRIPO60506 623 aaKnown RBP14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 ZRANB2O95218 330 aaKnown RBP eCLIP14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 CD48P09326 243 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 IL4RP24394 825 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 NUMBP49757 651 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 SLC20A2Q08357 652 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 PARP15Q460N3 678 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 RETSATQ6NUM9 610 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 NT5DC3Q86UY8 548 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 VSIG1Q86XK7 387 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 LRRC57Q8N9N7 239 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 DCAF4L2Q8NA75 395 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 KDM1BQ8NB78 822 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 OR7D4Q8NG98 312 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 RAPGEF5Q92565 580 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 TSC1Q92574 1164 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 RNF25Q96BH1 459 aaPredicted RBP14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 RPL10LQ96L21 214 aaKnown RBP14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 ALS2CR12Q96Q35 445 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 PSMB7Q99436 277 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 PRRX2Q99811 253 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 PRDM16Q9HAZ2 1276 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 CACNA2D2Q9NY47 1150 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 PCDHA3Q9Y5H8 950 aa14.96□□□□□ -0.01
NCKIPSD-207ENST00000453349 ZNF487B1APH4 448 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 RASA4BC9J798 803 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 DCLK1O15075 740 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 RASA4O43374 803 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 KDELR3O43731 214 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 EPHX1P07099 455 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 HOXB2P14652 356 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 CTNNA2P26232 953 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 SERPINB6P35237 376 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 ACVRL1P37023 503 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 CETN2P41208 172 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 IL12RB1P42701 662 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 CTSOP43234 321 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 DGKEP52429 567 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 SATB1Q01826 763 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 ENPP2Q13822 863 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 STARD3Q14849 445 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 CRY1Q16526 586 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 PTPRNQ16849 979 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 ACCSLQ4AC99 568 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 KATNAL2Q8IYT4 538 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 CAMKK1Q8N5S9 505 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 UBL4BQ8N7F7 174 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 CELF6Q96J87 481 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 RNF157Q96PX1 679 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 GABRG3Q99928 467 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 ACE2Q9BYF1 805 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 SLC39A8Q9C0K1 460 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 TMEM245Q9H330 911 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms