RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 C14orf80Q86SX3 495 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 SETD7Q8WTS6 366 aaKnown RBP13.25□□□□□ -0.29
CHD3-206ENST00000452447 TBCBQ99426 244 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 SCNM1Q9BWG6 230 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 GANQ9H2C0 597 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 IL21RQ9HBE5 538 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 TM9SF3Q9HD45 589 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 TM7SF3Q9NS93 570 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 SERGEFQ9UGK8 458 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D30Q9Y2I9 924 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 SLCO1B1Q9Y6L6 691 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 DOCK9Q9BZ29 2069 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 TRIM16O95361 564 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 RHOCP08134 193 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 ZNF883P0CG24 379 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 VAV1P15498 845 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 GOT1P17174 413 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 SPINK2P20155 84 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 SOX5P35711 763 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 FLT3P36888 993 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 GRIA4P48058 902 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 VASPP50552 380 aaPredicted RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 NOMO3P69849 1222 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 KRT83P78385 493 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 CDR2Q01850 454 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 BNC1Q01954 994 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 STX1AQ16623 288 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 KIF19Q2TAC6 998 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 C5orf22Q49AR2 442 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 FAM46CQ5VWP2 391 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 OR52K2Q8NGK3 314 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 OR2T34Q8NGX1 318 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 FRS2Q8WU20 508 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 SLC20A1Q8WUM9 679 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 ALG14Q96F25 216 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 C1orf74Q96LT6 269 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 CAMK1GQ96NX5 476 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 ADAM33Q9BZ11 813 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 ADAMTS1Q9UHI8 967 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 ANKRD6Q9Y2G4 727 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 FNDC3AQ9Y2H6 1198 aaKnown RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 DAAM1Q9Y4D1 1078 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 WDFY3Q8IZQ1 3526 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 TP53BP1Q12888 1972 aaPredicted RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 CNTN5O94779 1100 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 TOP3BO95985 862 aaKnown RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 IGHV4-34P06331 123 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 STAT1P42224 750 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 COPB1P53618 953 aaKnown RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 RACK1P63244 317 aaKnown RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 FAM193AP78312 1265 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 MYL5Q02045 173 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 DLG2Q15700 870 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 ZNF423Q2M1K9 1284 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 ALFQ53S48 1182 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 ARCQ7LC44 396 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 AADATQ8N5Z0 425 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 NEK11Q8NG66 645 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 OR14C36Q8NHC7 312 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 SKA1Q96BD8 255 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 C2orf49Q9BVC5 232 aaPredicted RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 ACE2Q9BYF1 805 aaPredicted RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 ANLNQ9NQW6 1124 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 NOCTQ9UK39 431 aaKnown RBP13.24□□□□□ -0.29
CHD3-206ENST00000452447 WASF3Q9UPY6 502 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 OR51B4Q9Y5P0 310 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 SNX11Q9Y5W9 270 aa13.24□□□□□ -0.29
CHD3-206ENST00000452447 PLXNA2O75051 1894 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 AKAP13Q12802 2813 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3DA0A087WVF3 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3IA0A087WXS9 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3EA0A087X179 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3KA0A087X1G2 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 A0A1W2PPC4 97 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3FA6NER0 549 aaPredicted RBP13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3LB9A6J9 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 HYAL3O43820 417 aaPredicted RBP13.23□□□□□ -0.29
CHD3-206ENST00000452447 ATP9BO43861 1147 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 BNIP3LO60238 219 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 SRGAP2O75044 1071 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 MBD3O95983 291 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3HP0C7X1 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 OR1E1P30953 314 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 ADPRHP54922 357 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 C21orf59P57076 290 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 JAM2P57087 298 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 UBXN1Q04323 297 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 SYCP1Q15431 976 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 C6orf118Q5T5N4 469 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3GQ6DHY5 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TBC1D3CQ6IPX1 549 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 UNQ6494/PRO21346Q6UXR6 183 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 SETD3Q86TU7 594 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms