RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FAM72CH0Y354 149 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 EEF2KO00418 725 aaKnown RBP10.99□□□□□ -0.65
PKP4-206ENST00000452162 CAPN9O14815 690 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 CREB3O43889 395 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 ZWINTO95229 277 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 GSTA2P09210 222 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 PRKCHP24723 683 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 SF3A3Q12874 501 aaKnown RBP eCLIP10.99□□□□□ -0.651e-6■■■■□ 23.1
PKP4-206ENST00000452162 PDK1Q15118 436 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 ZKSCAN8Q15776 578 aaPredicted RBP10.99□□□□□ -0.65
PKP4-206ENST00000452162 FAM72AQ5TYM5 149 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 FAM72DQ6L9T8 149 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 SYCE2Q6PIF2 218 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 DENND5BQ6ZUT9 1274 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 FAM72BQ86X60 149 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 SCML4Q8N228 414 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 IRGQQ8WZA9 623 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 CASP10Q92851 521 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 MSLNLQ96KJ4 702 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 XAB2Q9HCS7 855 aaKnown RBP10.99□□□□□ -0.65
PKP4-206ENST00000452162 MAN1C1Q9NR34 630 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 TMLHEQ9NVH6 421 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 THEGQ9P2T0 379 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 DSEQ9UL01 958 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 ARHGEF37A1IGU5 675 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 RNF103O00237 685 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 TRDMT1O14717 391 aaKnown RBP10.99□□□□□ -0.65
PKP4-206ENST00000452162 NCAM1P13591 858 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 FDFT1P37268 417 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 PDK4Q16654 411 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 PM20D1Q6GTS8 502 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 ANKRD54Q6NXT1 300 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 SPATA21Q7Z572 469 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 BANPQ8N9N5 519 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 NETO2Q8NC67 525 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 ALKBH8Q96BT7 664 aaKnown RBP10.99□□□□□ -0.65
PKP4-206ENST00000452162 P2RY11Q96G91 374 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 PAIP2Q9BPZ3 127 aaKnown RBP10.99□□□□□ -0.65
PKP4-206ENST00000452162 PRKAG3Q9UGI9 489 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 CDH22Q9UJ99 828 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 NCOR1O75376 2440 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 PTPRDP23468 1912 aa10.99□□□□□ -0.65
PKP4-206ENST00000452162 IQANK1A0A1B0GTG1 560 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 OPHN1O60890 802 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 RFPL2O75678 378 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SUN1O94901 812 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 BDNFP23560 247 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 GRIA1P42261 906 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 HCAR3P49019 387 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 CXCR3P49682 368 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 KCNQ1P51787 676 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 CDK16Q00536 496 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 WASHC5Q12768 1159 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 UNC5AQ6ZN44 842 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SH2D5Q6ZV89 423 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 LRRTM3Q86VH5 581 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 MPP5Q8N3R9 675 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 KREMEN2Q8NCW0 462 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 EBNA1BP2Q99848 306 aaKnown RBP10.98□□□□□ -0.65
PKP4-206ENST00000452162 DMAP1Q9NPF5 467 aaPredicted RBP10.98□□□□□ -0.65
PKP4-206ENST00000452162 EIF2B3Q9NR50 452 aaKnown RBP10.98□□□□□ -0.65
PKP4-206ENST00000452162 DDIT4Q9NX09 232 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 CAPN7Q9Y6W3 813 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 CXorf49A8MYA2 514 aaPredicted RBP10.98□□□□□ -0.65
PKP4-206ENST00000452162 PPP1R12AO14974 1030 aaPredicted RBP10.98□□□□□ -0.65
PKP4-206ENST00000452162 FAM155BO75949 473 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 STK10O94804 968 aaKnown RBP10.98□□□□□ -0.65
PKP4-206ENST00000452162 ABLIM3O94929 683 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 APOEP02649 317 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 INHBAP08476 426 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SRGAP2BP0DMP2 458 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 MLNP12872 115 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 CPB1P15086 417 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 ERCC2P18074 760 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SLC18A2Q05940 514 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 AP1B1Q10567 949 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 LVRNQ6Q4G3 990 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 RNF19BQ6ZMZ0 732 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 TRPM8Q7Z2W7 1104 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SLC26A11Q86WA9 606 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 TP53INP2Q8IXH6 220 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 ZNF461Q8TAF7 563 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 EDEM1Q92611 657 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 GRAMD1AQ96CP6 724 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SERAC1Q96JX3 654 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 PGLYRP2Q96PD5 576 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 SMYD2Q9NRG4 433 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 CD207Q9UJ71 328 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 ZNF180Q9UJW8 692 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 RAD54BQ9Y620 910 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 MUC3AQ02505 3323 aa10.98□□□□□ -0.65
PKP4-206ENST00000452162 OR6C75A6NL08 312 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 TM9SF1O15321 606 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 VNN2O95498 520 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 F9P00740 461 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 MT-ND3P03897 115 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 GBP2P32456 591 aaPredicted RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 SCTRP47872 440 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 NEK3P51956 506 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms