RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 FAM228BP0C875 321 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 VAV1P15498 845 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 CD6P30203 668 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 L1CAMP32004 1257 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 SF3A2Q15428 464 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 CCDC6Q16204 474 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 KIAA1324Q6UXG2 1013 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF783Q6ZMS7 281 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 PYROXD2Q8N2H3 581 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 RNF214Q8ND24 703 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 PRCCQ92733 491 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 FAM131CQ96AQ9 280 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 HINFPQ9BQA5 517 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 ACE2Q9BYF1 805 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 ZYG11BQ9C0D3 744 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 SMOC1Q9H4F8 434 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 VPS45Q9NRW7 570 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 PILRBQ9UKJ0 227 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 FZD10Q9ULW2 581 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 EDDM13A0A1B0GTR0 161 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 TM4SF5O14894 197 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 ZBTB24O43167 697 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 GDF9O60383 454 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 SNAP91O60641 907 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF821O75541 412 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 RHOQP17081 205 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 NUMBP49757 651 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 CREB5Q02930 508 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 LMNB2Q03252 620 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 TBX2Q13207 712 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 ARL13BQ3SXY8 428 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 SARM1Q6SZW1 724 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 TMC6Q7Z403 805 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 TFAP2DQ7Z6R9 452 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 SLFN11Q7Z7L1 901 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 C1orf216Q8TAB5 229 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 DNASE2BQ8WZ79 361 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 VOPP1Q96AW1 172 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 TOE1Q96GM8 510 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 PPP1R9BQ96SB3 815 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 NOL6Q9H6R4 1146 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 TMEM248Q9NWD8 314 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 CNOT8Q9UFF9 292 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 VPS51Q9UID3 782 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 THADAQ6YHU6 1953 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 DOCK4Q8N1I0 1966 aa16.53■□□□□ 0.24
SCAMP4-205ENST00000452128 NUMA1Q14980 2115 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 CXorf51AA0A1B0GTR3 108 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 WASH4PA8MWX3 477 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 MAP3K13O43283 966 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 FOXD2O60548 495 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 CYP1A2P05177 515 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 RHOCP08134 193 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 MYBL1P10243 752 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 ITPKAP23677 461 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 OXTRP30559 389 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 AIF1P55008 147 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 ST8SIA6P61647 398 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 ARHGAP8P85298 464 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 RPL6Q02878 288 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF33AQ06730 810 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 TCEAL6Q6IPX3 200 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 DCUN1D2Q6PH85 259 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 SYT12Q8IV01 421 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 STK40Q8N2I9 435 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 SH2D3CQ8N5H7 860 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 DEFB119Q8N690 84 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 DCAF4L2Q8NA75 395 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 CADM4Q8NFZ8 388 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 OR7D4Q8NG98 312 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 TCEAL3Q969E4 200 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 PEBP4Q96S96 227 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 EVLQ9UI08 416 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 VPS28Q9UK41 221 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 USP18Q9UMW8 372 aa16.52■□□□□ 0.24
SCAMP4-205ENST00000452128 METTL12A8MUP2 240 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 PATE3B3GLJ2 98 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 K7ERQ8 282 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 CBFA2T2O43439 604 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 SMAD6O43541 496 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 SRCP12931 536 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 GLDCP23378 1020 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 OR1E1P30953 314 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 ACSL1P33121 698 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 HOXD12P35452 270 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 DHPSP49366 369 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 LIMK1P53667 647 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 DLG2Q15700 870 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 C6orf118Q5T5N4 469 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 ZNF776Q68DI1 518 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 OR8K1Q8NGG5 319 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 PCED1AQ9H1Q7 454 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 SERGEFQ9UGK8 458 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 PPM1HQ9ULR3 514 aa16.51■□□□□ 0.23
SCAMP4-205ENST00000452128 TNRC6BQ9UPQ9 1833 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms