RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CACNA1EQ15878 2313 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 FAM170AA1A519 330 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 TARSL2A2RTX5 802 aaKnown RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 TTC34A8MYJ7 566 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 UPK3BL1B0FP48 263 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 UPK3BL2E5RIL1 263 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 RNASEH2AO75792 299 aaKnown RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 UCHL3P15374 230 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 CYP11B1P15538 503 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 CTSOP43234 321 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 PSMD8P48556 350 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 ZNF177Q13360 481 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 ACCSLQ4AC99 568 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 FAM102AQ5T9C2 384 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 DPY19L2P1Q6NXN4 242 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 SLC26A9Q7LBE3 791 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 ERICH1Q86X53 443 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 MMAAQ8IVH4 418 aaKnown RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 APCDD1Q8J025 514 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 SETD7Q8WTS6 366 aaKnown RBP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 BAP1Q92560 729 aa22.28■■□□□ 1.16
C9orf3-208ENST00000451893 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.28■■□□□ 1.16
C9orf3-208ENST00000451893 A0A1W2PP55 124 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 LRRC72A6NJI9 287 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 ACACBO00763 2458 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 MID1O15344 667 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 POLR2FP61218 127 aaKnown RBP22.27■■□□□ 1.16
C9orf3-208ENST00000451893 CST6Q15828 149 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 FBXL22Q6P050 247 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 USP30Q70CQ3 517 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 NAXDQ8IW45 347 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 CCDC170Q8IYT3 715 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 C18orf8Q96DM3 657 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 LMLNQ96KR4 655 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 WDCPQ9H6R7 721 aa22.27■■□□□ 1.16
C9orf3-208ENST00000451893 NYNRINQ9P2P1 1898 aaKnown RBP22.27■■□□□ 1.16
C9orf3-208ENST00000451893 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-208ENST00000451893 A0A1B0GVT2 93 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 PCNX2A6NKB5 2137 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 ZSCAN12O43309 604 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 SH3BP5O60239 455 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 IL1BP01584 269 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 SPINK2P20155 84 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 CSNK1EP49674 416 aaKnown RBP22.26■■□□□ 1.15
C9orf3-208ENST00000451893 CENPCQ03188 943 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 DEUP1Q05D60 604 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 AUHQ13825 339 aaKnown RBP22.26■■□□□ 1.15
C9orf3-208ENST00000451893 LRRC31Q6UY01 552 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 DSG4Q86SJ6 1040 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 PIP4P1Q86T03 277 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 SKA1Q96BD8 255 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 MRGPRX3Q96LB0 322 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 MUC3BQ9H195 1237 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 SPTLC3Q9NUV7 552 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 AIPL1Q9NZN9 384 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 VPS28Q9UK41 221 aa22.26■■□□□ 1.15
C9orf3-208ENST00000451893 BZW2Q9Y6E2 419 aaKnown RBP22.26■■□□□ 1.15
C9orf3-208ENST00000451893 GOLGA8SH3BPF8 625 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 EPHB6O15197 1021 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 PAGE1O75459 146 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 ADH1BP00325 375 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 F9P00740 461 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 CCDC172P0C7W6 258 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 MZF1P28698 734 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-208ENST00000451893 SLC8A1P32418 973 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 GGCXP38435 758 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 STK19P49842 368 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-208ENST00000451893 C21orf59P57076 290 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 SUZ12Q15022 739 aaKnown RBP22.25■■□□□ 1.15
C9orf3-208ENST00000451893 BRMS1LQ5PSV4 323 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 SFMBT2Q5VUG0 894 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 KIAA0895LQ68EN5 471 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 STK40Q8N2I9 435 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 BIRC7Q96CA5 298 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 MYO19Q96H55 970 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 SPAG5Q96R06 1193 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 PRMT1Q99873 361 aaKnown RBP22.25■■□□□ 1.15
C9orf3-208ENST00000451893 SCNM1Q9BWG6 230 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 STK33Q9BYT3 514 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 TKTL2Q9H0I9 626 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 TM7SF3Q9NS93 570 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 SLCO3A1Q9UIG8 710 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 HS3ST4Q9Y661 456 aa22.25■■□□□ 1.15
C9orf3-208ENST00000451893 GOLGA6L9A6NEM1 432 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 BNIP3LO60238 219 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 CLDN11O75508 207 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 TRIM16O95361 564 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 CD59P13987 128 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 CD27P26842 260 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 CYLC1P35663 651 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-208ENST00000451893 ELAVL3Q14576 367 aaKnown RBP22.24■■□□□ 1.15
C9orf3-208ENST00000451893 TRIP6Q15654 476 aaKnown RBP22.24■■□□□ 1.15
C9orf3-208ENST00000451893 HLA-BQ31612 363 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 C9orf64Q5T6V5 341 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 ADAM33Q9BZ11 813 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 TM9SF3Q9HD45 589 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 TMEM51Q9NW97 253 aa22.24■■□□□ 1.15
C9orf3-208ENST00000451893 LRRC53A6NM62 1247 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 F8VZ95 297 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms