RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 C11orf16Q9NQ32 467 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 RRAGDQ9NQL2 400 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-202ENST00000451053 RCOR3Q9P2K3 495 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-202ENST00000451053 RNF14Q9UBS8 474 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 OR51B4Q9Y5P0 310 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 ILVBLA1L0T0 632 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 FANCGO15287 622 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
VPS33A-202ENST00000451053 RNF40O75150 1001 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
VPS33A-202ENST00000451053 CTSOP43234 321 aaPredicted RBP13.36□□□□□ -0.27
VPS33A-202ENST00000451053 TNFRSF4P43489 277 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 KIR2DL1P43626 348 aaPredicted RBP13.36□□□□□ -0.27
VPS33A-202ENST00000451053 DNA2P51530 1060 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 OXCT1P55809 520 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 GNA12Q03113 381 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 SLC12A1Q13621 1099 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 LRRC32Q14392 662 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 DGKKQ5KSL6 1271 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 SEL1L2Q5TEA6 688 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 EGFLAMQ63HQ2 1017 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 Q6ZS52 159 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 UMODL1-AS1Q8N2C9 162 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 PQLC3Q8N755 202 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 NETO2Q8NC67 525 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 PBXIP1Q96AQ6 731 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 RBM41Q96IZ5 413 aaKnown RBP13.36□□□□□ -0.27
VPS33A-202ENST00000451053 CELF6Q96J87 481 aaKnown RBP13.36□□□□□ -0.27
VPS33A-202ENST00000451053 PSMB7Q99436 277 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 OSBPL6Q9BZF3 934 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 CIPCQ9C0C6 399 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 MUC3BQ9H195 1237 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 ZDHHC4Q9NPG8 344 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 ELOVL2Q9NXB9 296 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 CDC23Q9UJX2 597 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 SIT1Q9Y3P8 196 aa13.36□□□□□ -0.27
VPS33A-202ENST00000451053 F5P12259 2224 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 ZNF487B1APH4 448 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 RAMP2O60895 175 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
VPS33A-202ENST00000451053 POLR2EP19388 210 aaKnown RBP13.35□□□□□ -0.27
VPS33A-202ENST00000451053 AOC1P19801 751 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 GLDCP23378 1020 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 TIE1P35590 1138 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 ACVRL1P37023 503 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 CDKN2BP42772 138 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 PLK1P53350 603 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
VPS33A-202ENST00000451053 DMC1Q14565 340 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 EIF4HQ15056 248 aaKnown RBP13.35□□□□□ -0.27
VPS33A-202ENST00000451053 LLGL1Q15334 1064 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 WHAMMP3Q1A5X7 153 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 FBXO43Q4G163 708 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 C2orf27AQ580R0 203 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 CCDC181Q5TID7 509 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 AFMIDQ63HM1 303 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 PKN3Q6P5Z2 889 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 ZNF783Q6ZMS7 281 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 SPOCD1Q6ZMY3 1216 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 VSIG1Q86XK7 387 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 CCDC50Q8IVM0 306 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 ARHGAP12Q8IWW6 846 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 TP53INP2Q8IXH6 220 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 RCOR2Q8IZ40 523 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 EXD1Q8NHP7 514 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 USP33Q8TEY7 942 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 CYB5D2Q8WUJ1 264 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 ARHGEF2Q92974 986 aaKnown RBP13.35□□□□□ -0.27
VPS33A-202ENST00000451053 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 CLDN23Q96B33 292 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 HMCESQ96FZ2 354 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 ACOX2Q99424 681 aa13.35□□□□□ -0.27
VPS33A-202ENST00000451053 NAP1L3Q99457 506 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-202ENST00000451053 MUC22E2RYF6 1773 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-202ENST00000451053 TTC28Q96AY4 2481 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 RASA4BC9J798 803 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 NCAM2O15394 837 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 RASA4O43374 803 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 MFSD11O43934 449 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 SNAP91O60641 907 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 PYGMP11217 842 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 KRT10P13645 584 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 PAFAH1B1P43034 410 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 COPS2P61201 443 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 ZNF211Q13398 564 aaPredicted RBP13.34□□□□□ -0.27
VPS33A-202ENST00000451053 GAS6Q14393 721 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 POLD3Q15054 466 aaPredicted RBP13.34□□□□□ -0.27
VPS33A-202ENST00000451053 TAZQ16635 292 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 PTPRNQ16849 979 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 DCAF12L1Q5VU92 463 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 NCBP2-AS2Q69YL0 99 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 AADACL2Q6P093 401 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 BMP8AQ7Z5Y6 402 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 RFX6Q8HWS3 928 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 ALLCQ8N6M5 410 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 ZNF513Q8N8E2 541 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms