RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 H0Y626 953 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 DYNC1I1O14576 645 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CDX4O14627 284 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CYP1A2P05177 515 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 ATP5BP06576 529 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 DLDP09622 509 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 ACADMP11310 421 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 KRT3P12035 628 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CD6P30203 668 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CSKP41240 450 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 TPMTP51580 245 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CDH18Q13634 790 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 IFI16Q16666 785 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 UAP1L1Q3KQV9 507 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 C2CD6Q53TS8 623 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 PLEKHA7Q6IQ23 1121 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 DCUN1D2Q6PH85 259 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 ZNF662Q6ZS27 426 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 METTL3Q86U44 580 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 FAM124AQ86V42 546 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CIR1Q86X95 450 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 DNAAF5Q86Y56 855 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CCDC117Q8IWD4 279 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 RGL4Q8IZJ4 473 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 OR2T3Q8NH03 318 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 C16orf45Q96MC5 204 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 GPR174Q9BXC1 333 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 TMEM9BQ9NQ34 198 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 WSB2Q9NYS7 404 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 USP36Q9P275 1121 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CTTNBP2NLQ9P2B4 639 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 SLC12A6Q9UHW9 1150 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 EVLQ9UI08 416 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 LCMT1Q9UIC8 334 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 REXO2Q9Y3B8 237 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 CNOT1A5YKK6 2376 aaKnown RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 A0A0A6YYK5 440 aaPredicted RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 GOLGA6L9A6NEM1 432 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 SIGLEC16A6NMB1 481 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 BTNL10A8MVZ5 291 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 F5H5T6 163 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 DAB1O75553 588 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 LUC7L3O95232 432 aaKnown RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 ENGP17813 658 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 GGCXP38435 758 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 CTSOP43234 321 aaPredicted RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 MAPK8P45983 427 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 NOP2P46087 812 aaKnown RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 NAP1L1P55209 391 aaKnown RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 CAMK2GQ13555 558 aaPredicted RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 PITRM1Q5JRX3 1037 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 SLC26A9Q7LBE3 791 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 ARCQ7LC44 396 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 APCDD1Q8J025 514 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 RFFLQ8WZ73 363 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 TTC17Q96AE7 1141 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 ZNF419Q96HQ0 510 aaPredicted RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 NUP85Q9BW27 656 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 PRSS16Q9NQE7 514 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 METTL5Q9NRN9 209 aaKnown RBP17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 LAMA1P25391 3075 aa17.55■□□□□ 0.4
PRPF40A-204ENST00000450303 NUMA1Q14980 2115 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 M0QYT0 321 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 TFE3P19532 575 aaPredicted RBP17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 CCR1P32246 355 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 NOS2P35228 1153 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 MAMLD1Q13495 774 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 DUOXA1Q1HG43 343 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 PEAR1Q5VY43 1037 aaPredicted RBP17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 SLC23A3Q6PIS1 610 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 ZNF557Q8N988 423 aaPredicted RBP17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 SLC35G2Q8TBE7 412 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 MYO19Q96H55 970 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 PRMT1Q99873 361 aaKnown RBP17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 GTPBP2Q9BX10 602 aaKnown RBP17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 ADAM33Q9BZ11 813 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 KIAA1522Q9P206 1035 aaPredicted RBP17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 SLC6A14Q9UN76 642 aa17.54■□□□□ 0.4
PRPF40A-204ENST00000450303 MEI4A8MW99 385 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 ATMINO43313 823 aaPredicted RBP17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 ADRB1P08588 477 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 SLC2A3P11169 496 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 DPP6P42658 865 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 MATKP42679 507 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 ST8SIA6P61647 398 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 RPS14P62263 151 aaKnown RBP17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 TCEAL1Q15170 157 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 N4BP2L1Q5TBK1 243 aaPredicted RBP17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 OTUD1Q5VV17 481 aaPredicted RBP17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 DAB2IPQ5VWQ8 1189 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 FBXL22Q6P050 247 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 ZNF564Q8TBZ8 553 aaPredicted RBP17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 IGSF8Q969P0 613 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 ARHGEF26Q96DR7 871 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 MRGPRX3Q96LB0 322 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 RRN3Q9NYV6 651 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.53■□□□□ 0.46e-9■■□□□ 13.2
PRPF40A-204ENST00000450303 SUN2Q9UH99 717 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 STAP1Q9ULZ2 295 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms