RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LOC100653049A0A140TA62 436 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 H0YAE9 185 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TEX46H3BTG2 121 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 I3L521 148 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PRMT5O14744 637 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 ACOX3O15254 700 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ICMTO60725 284 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RFPL2O75678 378 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 VAPBO95292 243 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 HPRP00739 348 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MYL3P08590 195 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RARBP10826 455 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SLC9A1P19634 815 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 HLA-DPA1P20036 260 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DNAJB2P25686 324 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 EIF2DP41214 584 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 CASP2P42575 452 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RPL21P46778 160 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PPM1FP49593 454 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 GALCP54803 685 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PPP2R2BQ00005 443 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 YWHAHQ04917 246 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 HSPA14Q0VDF9 509 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MERTKQ12866 999 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PHKG1Q16816 387 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PROSER3Q2NL68 480 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 STXBP5Q5T5C0 1151 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CACHD1Q5VU97 1274 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SIGIRRQ6IA17 410 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PMF1Q6P1K2 205 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PNCKQ6P2M8 343 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 C16orf46Q6P387 395 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PLET1Q6UQ28 207 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CCDC71Q8IV32 467 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 UNC5CLQ8IV45 518 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CENPLQ8N0S6 344 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 OR8H3Q8N146 312 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 KDM1BQ8NB78 822 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 EXD1Q8NHP7 514 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 URGCPQ8TCY9 931 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TCTEX1D2Q8WW35 142 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DDX17Q92841 729 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 ROPN1LQ96C74 230 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CRELD1Q96HD1 420 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 HOPXQ9BPY8 73 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 USP44Q9H0E7 712 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MED28Q9H204 178 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 LRRC19Q9H756 370 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SMPD3Q9NY59 655 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PPP4R1LQ9P1A2 415 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 APEX2Q9UBZ4 518 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MAGEL2Q9UJ55 1249 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CFL2Q9Y281 166 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DNAJC16Q9Y2G8 782 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MTF2Q9Y483 593 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 RGPD3A6NKT7 1758 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 RGPD4Q7Z3J3 1758 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 METP08581 1390 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SALL3Q9BXA9 1300 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RAB19A4D1S5 217 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ANKRD34BA5PLL1 514 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 OR14I1A6ND48 311 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 KRBOX1C9JBD0 128 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 H7C1Q1 480 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 K7EPI3 171 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 K7ERI5 159 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FOXN3O00409 490 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 BET1O15155 118 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GATCO43716 136 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 VNN2O95498 520 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 LDOC1O95751 146 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 NR3C1P04150 777 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 S100A8P05109 93 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ANXA6P08133 673 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CLTBP09497 229 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FDPSP14324 419 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 GJA1P17302 382 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 BGNP21810 368 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PTX3P26022 381 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 KLRC1P26715 233 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TYK2P29597 1187 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SLC16A2P36021 539 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ARL4AP40617 200 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PRKCIP41743 596 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MAGEA2P43356 314 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RPS5P46782 204 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 CPA2P48052 419 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 POLD2P49005 469 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RAB5CP51148 216 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 HSD17B4P51659 736 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ABATP80404 500 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MAD2L1Q13257 205 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 MTMR2Q13614 643 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 NFYCQ13952 458 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 E2F2Q14209 437 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SEMA3AQ14563 771 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SKIV2LQ15477 1246 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 CA9Q16790 459 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PFKFB3Q16875 520 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 Q3ZCU0 254 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms