RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MROH9Q5TGP6 573 aa8.79□□□□□ -1
LSM5-208ENST00000450169 KRT39Q6A163 491 aa8.79□□□□□ -1
LSM5-208ENST00000450169 UGT3A1Q6NUS8 523 aa8.79□□□□□ -1
LSM5-208ENST00000450169 TATDN1Q6P1N9 297 aa8.79□□□□□ -1
LSM5-208ENST00000450169 ATG14Q6ZNE5 492 aa8.79□□□□□ -1
LSM5-208ENST00000450169 C1orf186Q6ZWK4 172 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SNX29P2Q8IUI4 249 aa8.79□□□□□ -1
LSM5-208ENST00000450169 CCDC60Q8IWA6 550 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 ZSWIM2Q8NEG5 633 aa8.79□□□□□ -1
LSM5-208ENST00000450169 FNIP1Q8TF40 1166 aa8.79□□□□□ -1
LSM5-208ENST00000450169 RAB2BQ8WUD1 216 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SEMA4DQ92854 862 aa8.79□□□□□ -1
LSM5-208ENST00000450169 RCN3Q96D15 328 aa8.79□□□□□ -1
LSM5-208ENST00000450169 TXNDC15Q96J42 360 aa8.79□□□□□ -1
LSM5-208ENST00000450169 FAM84BQ96KN1 310 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 C11orf70Q9BRQ4 267 aa8.79□□□□□ -1
LSM5-208ENST00000450169 TRIT1Q9H3H1 467 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 NOL6Q9H6R4 1146 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 NOL11Q9H8H0 719 aaKnown RBP8.79□□□□□ -1
LSM5-208ENST00000450169 COG4Q9H9E3 785 aa8.79□□□□□ -1
LSM5-208ENST00000450169 HACD3Q9P035 362 aa8.79□□□□□ -1
LSM5-208ENST00000450169 SAE1Q9UBE0 346 aaPredicted RBP8.79□□□□□ -1
LSM5-208ENST00000450169 PI4KBQ9UBF8 816 aa8.79□□□□□ -1
LSM5-208ENST00000450169 GPSM3Q9Y4H4 160 aa8.79□□□□□ -1
LSM5-208ENST00000450169 AFG3L2Q9Y4W6 797 aa8.79□□□□□ -1
LSM5-208ENST00000450169 ZSCAN5BA6NJL1 495 aa8.78□□□□□ -1
LSM5-208ENST00000450169 GPR25O00155 361 aa8.78□□□□□ -1
LSM5-208ENST00000450169 SOCS2O14508 198 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ALX3O95076 343 aa8.78□□□□□ -1
LSM5-208ENST00000450169 CKMT2P17540 419 aa8.78□□□□□ -1
LSM5-208ENST00000450169 SERPINB1P30740 379 aa8.78□□□□□ -1
LSM5-208ENST00000450169 IFNA8P32881 189 aa8.78□□□□□ -1
LSM5-208ENST00000450169 PTPN7P35236 360 aa8.78□□□□□ -1
LSM5-208ENST00000450169 QARSP47897 775 aaKnown RBP8.78□□□□□ -1
LSM5-208ENST00000450169 NME5P56597 212 aa8.78□□□□□ -1
LSM5-208ENST00000450169 IFITM3Q01628 133 aa8.78□□□□□ -1
LSM5-208ENST00000450169 PRKG1Q13976 671 aa8.78□□□□□ -1
LSM5-208ENST00000450169 LRIT3Q3SXY7 679 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ASPRV1Q53RT3 343 aa8.78□□□□□ -1
LSM5-208ENST00000450169 SLX4IPQ5VYV7 408 aa8.78□□□□□ -1
LSM5-208ENST00000450169 COLGALT2Q8IYK4 626 aa8.78□□□□□ -1
LSM5-208ENST00000450169 FAM156AQ8NDB6 213 aa8.78□□□□□ -1
LSM5-208ENST00000450169 OR13F1Q8NGS4 319 aa8.78□□□□□ -1
LSM5-208ENST00000450169 RP9Q8TA86 221 aaKnown RBP8.78□□□□□ -1
LSM5-208ENST00000450169 GABPB2Q8TAK5 448 aaPredicted RBP8.78□□□□□ -1
LSM5-208ENST00000450169 CXorf38Q8TB03 319 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ASB9Q96DX5 294 aa8.78□□□□□ -1
LSM5-208ENST00000450169 FEM1CQ96JP0 617 aa8.78□□□□□ -1
LSM5-208ENST00000450169 YME1L1Q96TA2 773 aa8.78□□□□□ -1
LSM5-208ENST00000450169 RMDN3Q96TC7 470 aa8.78□□□□□ -1
LSM5-208ENST00000450169 GPN2Q9H9Y4 310 aaPredicted RBP8.78□□□□□ -1
LSM5-208ENST00000450169 NEK6Q9HC98 313 aa8.78□□□□□ -1
LSM5-208ENST00000450169 TBC1D22BQ9NU19 505 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ANGPTL3Q9Y5C1 460 aa8.78□□□□□ -1
LSM5-208ENST00000450169 COL24A1Q17RW2 1714 aa8.78□□□□□ -1
LSM5-208ENST00000450169 GOLGA8QA0A0J9YX86 632 aa8.78□□□□□ -1
LSM5-208ENST00000450169 GOLGA8OA6NCC3 632 aa8.78□□□□□ -1
LSM5-208ENST00000450169 TBKBP1A7MCY6 615 aa8.78□□□□□ -1
LSM5-208ENST00000450169 TISP43B9A030 160 aa8.78□□□□□ -1
LSM5-208ENST00000450169 GOLGA8NF8WBI6 632 aa8.78□□□□□ -1
LSM5-208ENST00000450169 TAF4O00268 1085 aa8.78□□□□□ -1
LSM5-208ENST00000450169 AURKAO14965 403 aa8.78□□□□□ -1
LSM5-208ENST00000450169 TBX3O15119 743 aa8.78□□□□□ -1
LSM5-208ENST00000450169 PMM2O15305 246 aa8.78□□□□□ -1
LSM5-208ENST00000450169 HOXC11O43248 304 aaPredicted RBP8.78□□□□□ -1
LSM5-208ENST00000450169 ASNA1O43681 348 aa8.78□□□□□ -1
LSM5-208ENST00000450169 CPNE6O95741 557 aa8.78□□□□□ -1
LSM5-208ENST00000450169 NAT2P11245 290 aa8.78□□□□□ -1
LSM5-208ENST00000450169 KRT3P12035 628 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ARRB2P32121 409 aa8.78□□□□□ -1
LSM5-208ENST00000450169 CDKN2BP42772 138 aa8.78□□□□□ -1
LSM5-208ENST00000450169 RAD23AP54725 363 aa8.78□□□□□ -1
LSM5-208ENST00000450169 DYNLT1P63172 113 aa8.78□□□□□ -1
LSM5-208ENST00000450169 RHDQ02161 417 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ART3Q13508 389 aa8.78□□□□□ -1
LSM5-208ENST00000450169 BFSP2Q13515 415 aa8.78□□□□□ -1
LSM5-208ENST00000450169 PCLAFQ15004 111 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ARHGEF6Q15052 776 aa8.78□□□□□ -1
LSM5-208ENST00000450169 EML3Q32P44 896 aa8.78□□□□□ -1
LSM5-208ENST00000450169 SLC9B1Q4ZJI4 515 aa8.78□□□□□ -1
LSM5-208ENST00000450169 STXBP5Q5T5C0 1151 aa8.78□□□□□ -1
LSM5-208ENST00000450169 IQSEC1Q6DN90 963 aa8.78□□□□□ -1
LSM5-208ENST00000450169 TTBK2Q6IQ55 1244 aa8.78□□□□□ -1
LSM5-208ENST00000450169 USP17L6PQ6QN14 398 aa8.78□□□□□ -1
LSM5-208ENST00000450169 EPGNQ6UW88 154 aa8.78□□□□□ -1
LSM5-208ENST00000450169 SLC30A10Q6XR72 485 aa8.78□□□□□ -1
LSM5-208ENST00000450169 CYP4V2Q6ZWL3 525 aaPredicted RBP8.78□□□□□ -1
LSM5-208ENST00000450169 CHSY3Q70JA7 882 aa8.78□□□□□ -1
LSM5-208ENST00000450169 HERC6Q8IVU3 1022 aa8.78□□□□□ -1
LSM5-208ENST00000450169 TTC30BQ8N4P2 665 aa8.78□□□□□ -1
LSM5-208ENST00000450169 ACTL9Q8TC94 416 aa8.78□□□□□ -1
LSM5-208ENST00000450169 PPWD1Q96BP3 646 aaKnown RBP8.78□□□□□ -1
LSM5-208ENST00000450169 ACSF2Q96CM8 615 aaPredicted RBP8.78□□□□□ -1
LSM5-208ENST00000450169 CNDP1Q96KN2 507 aa8.78□□□□□ -1
LSM5-208ENST00000450169 FBXL18Q96ME1 805 aa8.78□□□□□ -1
LSM5-208ENST00000450169 NT5C1BQ96P26 610 aa8.78□□□□□ -1
LSM5-208ENST00000450169 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
LSM5-208ENST00000450169 EIF2AK1Q9BQI3 630 aaKnown RBP8.78□□□□□ -1
LSM5-208ENST00000450169 ADI1Q9BV57 179 aa8.78□□□□□ -1
LSM5-208ENST00000450169 SLC7A5P2Q9GIP4 190 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms