RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 DMDP11532 3685 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 TULP3O75386 442 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 LRIG2O94898 1065 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 LATS1O95835 1130 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 CD48P09326 243 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 RARAP10276 462 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 NR1D1P20393 614 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 COMTP21964 271 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 GALK1P51570 392 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 KDSRQ06136 332 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 PHTF2Q8N3S3 785 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 NETO2Q8NC67 525 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 HSPH1Q92598 858 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 NTAN1Q96AB6 310 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 ARL8AQ96BM9 186 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 RPRD1AQ96P16 312 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-203ENST00000449575 RBM12Q9NTZ6 932 aaKnown RBP10.13□□□□□ -0.79
CCDC171-203ENST00000449575 NDFIP2Q9NV92 336 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 NDRG2Q9UN36 371 aaKnown RBP10.13□□□□□ -0.79
CCDC171-203ENST00000449575 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
CCDC171-203ENST00000449575 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-203ENST00000449575 A0A0A6YYK5 440 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 FAM86C2PA6NEL3 165 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 E9PAM4 449 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 F5H5T6 163 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 PI4K2BG5E9Z4 385 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 HOXC11O43248 304 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 PRPSAP2O60256 369 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 ADH1CP00326 375 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 GCKP35557 465 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 MARCKSL1P49006 195 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 HADHBP55084 474 aaKnown RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 PFKPQ01813 784 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 GAD2Q05329 585 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 SCAPQ12770 1279 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 ERMARDQ5T6L9 678 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 MANEALQ5VSG8 457 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 RINLQ6ZS11 566 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 TRIM67Q6ZTA4 783 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 TFAP2DQ7Z6R9 452 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 KIAA1958Q8N8K9 716 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 CCHCR1Q8TD31 782 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 HAPLN3Q96S86 360 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 KCTD15Q96SI1 283 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 DHX35Q9H5Z1 703 aaKnown RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 C11orf16Q9NQ32 467 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 MARK1Q9P0L2 795 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 SLC12A6Q9UHW9 1150 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 ALG6Q9Y672 507 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 TNFRSF10AO00220 468 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 CREB3O43889 395 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 CACNG3O60359 315 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 HLA-FP30511 346 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 PCK1P35558 622 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 ATP1A2P50993 1020 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 C2orf54Q08AI8 447 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 SIGLEC14Q08ET2 396 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 KIF5AQ12840 1032 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 SEMA3BQ13214 749 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 XRCC4Q13426 336 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 RBBP5Q15291 538 aaKnown RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 LACTB2Q53H82 288 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 PPP6R3Q5H9R7 873 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 ZNF687Q8N1G0 1237 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 CARNMT1Q8N4J0 409 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 ZNF483Q8TF39 744 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 FAM3CQ92520 227 aa10.12□□□□□ -0.79
CCDC171-203ENST00000449575 DNAJC17Q9NVM6 304 aaKnown RBP10.12□□□□□ -0.79
CCDC171-203ENST00000449575 PI15O43692 258 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 CISD3P0C7P0 127 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 TARSP26639 723 aaKnown RBP10.11□□□□□ -0.79
CCDC171-203ENST00000449575 L1CAMP32004 1257 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 CD70P32970 193 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 RWDD2BP57060 319 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 FZD5Q13467 585 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 ACAP1Q15027 740 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 GEN1Q17RS7 908 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 MPPE1Q53F39 396 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 TMEM215Q68D42 235 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 FSTL4Q6MZW2 842 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 ANKS1BQ7Z6G8 1248 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 IFT20Q8IY31 132 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 MREGQ8N565 214 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 LRRC57Q8N9N7 239 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 TRIM58Q8NG06 486 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 C1orf74Q96LT6 269 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 ZIM3Q96PE6 472 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 OSBPL2Q9H1P3 480 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 LUC7LQ9NQ29 371 aaKnown RBP10.11□□□□□ -0.79
CCDC171-203ENST00000449575 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC171-203ENST00000449575 POLR3BQ9NW08 1133 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-203ENST00000449575 ETAA1Q9NY74 926 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 ZNF212Q9UDV6 495 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 HCN2Q9UL51 889 aa10.11□□□□□ -0.79
CCDC171-203ENST00000449575 TPX2Q9ULW0 747 aaKnown RBP10.11□□□□□ -0.79
CCDC171-203ENST00000449575 PACSIN2Q9UNF0 486 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-203ENST00000449575 MFHAS1Q9Y4C4 1052 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms