RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PPIDQ08752 370 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 HTR4Q13639 388 aa20■□□□□ 0.79
SGCE-207ENST00000447873 DHX34Q14147 1143 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 SMAD2Q15796 467 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 HEATR6Q6AI08 1181 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 CXorf57Q6NSI4 855 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 ZNF783Q6ZMS7 281 aa20■□□□□ 0.79
SGCE-207ENST00000447873 LRRC49Q8IUZ0 686 aa20■□□□□ 0.79
SGCE-207ENST00000447873 HMCESQ96FZ2 354 aa20■□□□□ 0.79
SGCE-207ENST00000447873 FERMT1Q9BQL6 677 aa20■□□□□ 0.79
SGCE-207ENST00000447873 LRRC1Q9BTT6 524 aa20■□□□□ 0.79
SGCE-207ENST00000447873 RPP25Q9BUL9 199 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 TRMT61BQ9BVS5 477 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 MUC3BQ9H195 1237 aa20■□□□□ 0.79
SGCE-207ENST00000447873 PRUNE2Q8WUY3 3088 aa20■□□□□ 0.79
SGCE-207ENST00000447873 A0A0D9SEW6 157 aa20■□□□□ 0.79
SGCE-207ENST00000447873 CFAP69A5D8W1 941 aa20■□□□□ 0.79
SGCE-207ENST00000447873 C2CD4DB7Z1M9 353 aa20■□□□□ 0.79
SGCE-207ENST00000447873 ANHXE9PGG2 379 aa20■□□□□ 0.79
SGCE-207ENST00000447873 TTI1O43156 1089 aa20■□□□□ 0.79
SGCE-207ENST00000447873 RAD51CO43502 376 aa20■□□□□ 0.79
SGCE-207ENST00000447873 ARSAP15289 507 aa20■□□□□ 0.79
SGCE-207ENST00000447873 RBL1P28749 1068 aa20■□□□□ 0.79
SGCE-207ENST00000447873 STIP1P31948 543 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 PRKD1Q15139 912 aaPredicted RBP20■□□□□ 0.79
SGCE-207ENST00000447873 PPP1R7Q15435 360 aa20■□□□□ 0.79
SGCE-207ENST00000447873 FSCBQ5H9T9 825 aa20■□□□□ 0.79
SGCE-207ENST00000447873 RNF219Q5W0B1 726 aaPredicted RBP20■□□□□ 0.79
SGCE-207ENST00000447873 RNF43Q68DV7 783 aa20■□□□□ 0.79
SGCE-207ENST00000447873 PTCRAQ6ISU1 281 aaPredicted RBP20■□□□□ 0.79
SGCE-207ENST00000447873 PLCD3Q8N3E9 789 aa20■□□□□ 0.79
SGCE-207ENST00000447873 ALLCQ8N6M5 410 aa20■□□□□ 0.79
SGCE-207ENST00000447873 OR52K2Q8NGK3 314 aa20■□□□□ 0.79
SGCE-207ENST00000447873 FIBINQ8TAL6 211 aa20■□□□□ 0.79
SGCE-207ENST00000447873 UBXN4Q92575 508 aa20■□□□□ 0.79
SGCE-207ENST00000447873 SLCO2A1Q92959 643 aa20■□□□□ 0.79
SGCE-207ENST00000447873 KIAA1522Q9P206 1035 aaPredicted RBP20■□□□□ 0.79
SGCE-207ENST00000447873 CHADO15335 359 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 KCNN4O15554 427 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ADH5P11766 374 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 GDI1P31150 447 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ACVRL1P37023 503 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ETFBP38117 255 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 PTGIRP43119 386 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 OXCT1P55809 520 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 GAD2Q05329 585 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ZNF33AQ06730 810 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 PUS10Q3MIT2 529 aaKnown RBP19.99■□□□□ 0.79
SGCE-207ENST00000447873 GLE1Q53GS7 698 aaKnown RBP19.99■□□□□ 0.79
SGCE-207ENST00000447873 IL31Q6EBC2 164 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ARHGAP36Q6ZRI8 547 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 CCDC13Q8IYE1 715 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ZNF557Q8N988 423 aaPredicted RBP19.99■□□□□ 0.79
SGCE-207ENST00000447873 FAM71DQ8N9W8 422 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 OR7D4Q8NG98 312 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 MAFAQ8NHW3 353 aaPredicted RBP19.99■□□□□ 0.79
SGCE-207ENST00000447873 WFDC5Q8TCV5 224 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 HTR3CQ8WXA8 447 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ARHGEF2Q92974 986 aaKnown RBP19.99■□□□□ 0.79
SGCE-207ENST00000447873 SPON2Q9BUD6 331 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ECT2Q9H8V3 914 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 IPO11Q9UI26 975 aaKnown RBP19.99■□□□□ 0.79
SGCE-207ENST00000447873 CLEC4EQ9ULY5 219 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 FAM50BQ9Y247 325 aa19.99■□□□□ 0.79
SGCE-207ENST00000447873 ZNF189O75820 626 aaPredicted RBP19.98■□□□□ 0.79
SGCE-207ENST00000447873 IFNB1P01574 187 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 CCNCP24863 283 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 GDF10P55107 478 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 TNK2Q07912 1038 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 SERINC3Q13530 473 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 JAMLQ86YT9 394 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 CCDC89Q8N998 374 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 TSGA13Q96PP4 275 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 SP110Q9HB58 689 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 USP29Q9HBJ7 922 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 HPS4Q9NQG7 708 aa19.98■□□□□ 0.79
SGCE-207ENST00000447873 HOXC11O43248 304 aaPredicted RBP19.97■□□□□ 0.79
SGCE-207ENST00000447873 MTSS1O43312 755 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 MAFKO60675 156 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 RHOXF2BP0C7M4 288 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 VAV1P15498 845 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 CSKP41240 450 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 NR1H3Q13133 447 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 RUNX3Q13761 415 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 KCTD19Q17RG1 926 aaPredicted RBP19.97■□□□□ 0.79
SGCE-207ENST00000447873 TIGD7Q6NT04 549 aaPredicted RBP19.97■□□□□ 0.79
SGCE-207ENST00000447873 SYDE1Q6ZW31 735 aaPredicted RBP19.97■□□□□ 0.79
SGCE-207ENST00000447873 CPA6Q8N4T0 437 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 NAT16Q8N8M0 369 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 XPO6Q96QU8 1125 aaKnown RBP19.97■□□□□ 0.79
SGCE-207ENST00000447873 RHOXF2Q9BQY4 288 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 FEM1AQ9BSK4 669 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 ATP13A1Q9HD20 1204 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 SEPT10Q9P0V9 454 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.97■□□□□ 0.79
SGCE-207ENST00000447873 HPCAL4Q9UM19 191 aa19.97■□□□□ 0.79
SGCE-207ENST00000447873 V9GYY5 206 aaPredicted RBP19.97■□□□□ 0.79
SGCE-207ENST00000447873 FAM187AA6NFU0 413 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 KCNK1O00180 336 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 STK10O94804 968 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms