RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 THEGLP0DJG4 465 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 TGM2P21980 687 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 MZF1P28698 734 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 MAT2AP31153 395 aaKnown RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 SLC11A2P49281 568 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 SGSHP51688 502 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 SLC8A3P57103 927 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 ECT2LQ008S8 904 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 STK38Q15208 465 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 QPCTQ16769 361 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 FOXD4L6Q3SYB3 417 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 FAM26FQ5R3K3 315 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PPP1R26Q5T8A7 1209 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 ZCCHC8Q6NZY4 707 aaKnown RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 CNNM4Q6P4Q7 775 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 SHC4Q6S5L8 630 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 FOXD4L3Q6VB84 417 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 RBM44Q6ZP01 1051 aaKnown RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 STK40Q8N2I9 435 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 TMEM145Q8NBT3 493 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 WDR48Q8TAF3 677 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 GOLGA5Q8TBA6 731 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 RNF139Q8WU17 664 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 TMEM174Q8WUU8 243 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PTPRN2Q92932 1015 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 AZIN2Q96A70 460 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 ZNF396Q96N95 335 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 SPAG5Q96R06 1193 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 SLC25A18Q9H1K4 315 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PREBQ9HCU5 417 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 KBTBD4Q9NVX7 518 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 ACSL6Q9UKU0 697 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 INTS6Q9UL03 887 aaKnown RBP7.33□□□□□ -1.24
LRRC28-203ENST00000447360 ERVW-1Q9UQF0 538 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 PCDHGA7Q9Y5G6 932 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 MYH10P35580 1976 aa7.33□□□□□ -1.24
LRRC28-203ENST00000447360 CENPEQ02224 2701 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 ITPR2Q14571 2701 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 CCDC187A0A096LP49 1063 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 TYW5A2RUC4 315 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 EME2A4GXA9 379 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 ENO4A6NNW6 628 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 IKBKBO14920 756 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 NOBOXO60393 691 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 MOCS3O95396 460 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 YEATS4O95619 227 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 NNMTP40261 264 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 AFMP43652 599 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 TKTL1P51854 596 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 HNRNPKP61978 463 aaKnown RBP eCLIP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 AMPD3Q01432 767 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 DNM1Q05193 864 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 ZNF177Q13360 481 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 FAM133BQ5BKY9 247 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 PITRM1Q5JRX3 1037 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 FAM46CQ5VWP2 391 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 RNF219Q5W0B1 726 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 BSPRYQ5W0U4 402 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 NUGGCQ68CJ6 796 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 SPOPLQ6IQ16 392 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 NEK5Q6P3R8 708 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 RFWD3Q6PCD5 774 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 SV2AQ7L0J3 742 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 BHLHA9Q7RTU4 235 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 DSG4Q86SJ6 1040 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 PIGZQ86VD9 579 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 DCP2Q8IU60 420 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 CCDC117Q8IWD4 279 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 UNC45BQ8IWX7 931 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 NELFCDQ8IXH7 590 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 PDILTQ8N807 584 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 ANKRD52Q8NB46 1076 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 HJURPQ8NCD3 748 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 FAM174AQ8TBP5 190 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 DDX50Q9BQ39 737 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 SRRTQ9BXP5 876 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 IMPG2Q9BZV3 1241 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 ABCC13Q9NSE7 274 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 GEMIN8Q9NWZ8 242 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 SFMBT1Q9UHJ3 866 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 SLCO3A1Q9UIG8 710 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 RCOR1Q9UKL0 485 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 PCDHA7Q9UN72 937 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 MAN2B2Q9Y2E5 1009 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 CSNK1G3Q9Y6M4 447 aa7.32□□□□□ -1.24
LRRC28-203ENST00000447360 SPTBN1Q01082 2364 aaKnown RBP7.32□□□□□ -1.24
LRRC28-203ENST00000447360 ACSL4O60488 711 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 CUTAO60888 179 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 RTN2O75298 545 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 IGLV3-27P01718 113 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 AKT2P31751 481 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 SOX11P35716 441 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 PIK3CAP42336 1068 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 CTSOP43234 321 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-203ENST00000447360 DLG4P78352 724 aa7.31□□□□□ -1.24
LRRC28-203ENST00000447360 EIF3IQ13347 325 aaKnown RBP7.31□□□□□ -1.24
LRRC28-203ENST00000447360 CDH18Q13634 790 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms