RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 OTUD4Q01804 1114 aaKnown RBP17.83■□□□□ 0.44
SGCE-206ENST00000445866 PDK1Q15118 436 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 NAIF1Q69YI7 327 aaPredicted RBP17.83■□□□□ 0.44
SGCE-206ENST00000445866 APCDD1Q8J025 514 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 ACTL9Q8TC94 416 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 C1orf54Q8WWF1 131 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 LMLNQ96KR4 655 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 HPCAL4Q9UM19 191 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 DUSP12Q9UNI6 340 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 RAD54BQ9Y620 910 aa17.83■□□□□ 0.44
SGCE-206ENST00000445866 TBC1D3BA6NDS4 549 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.82■□□□□ 0.44
SGCE-206ENST00000445866 NCAM2O15394 837 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 GLULP15104 373 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 EIF3EP60228 445 aaKnown RBP17.82■□□□□ 0.44
SGCE-206ENST00000445866 SERINC3Q13530 473 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 PREPLQ4J6C6 727 aaPredicted RBP17.82■□□□□ 0.44
SGCE-206ENST00000445866 TJAP1Q5JTD0 557 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 IER5LQ5T953 404 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 B4GALNT4Q76KP1 1039 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 ZC3H18Q86VM9 953 aaKnown RBP17.82■□□□□ 0.44
SGCE-206ENST00000445866 RALGPS2Q86X27 583 aaPredicted RBP17.82■□□□□ 0.44
SGCE-206ENST00000445866 LRRC49Q8IUZ0 686 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.82■□□□□ 0.44
SGCE-206ENST00000445866 LRRN4Q8WUT4 740 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 ALG14Q96F25 216 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 P2RY13Q9BPV8 354 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 FBRSL1Q9HCM7 1045 aaKnown RBP17.82■□□□□ 0.44
SGCE-206ENST00000445866 ATP13A1Q9HD20 1204 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 CD320Q9NPF0 282 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 SLC27A6Q9Y2P4 619 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 OR51B4Q9Y5P0 310 aa17.82■□□□□ 0.44
SGCE-206ENST00000445866 H7C0C1 242 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 CBX4O00257 560 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 PDE2AO00408 941 aaPredicted RBP17.81■□□□□ 0.44
SGCE-206ENST00000445866 CTHP32929 405 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 EIF2DP41214 584 aaKnown RBP17.81■□□□□ 0.44
SGCE-206ENST00000445866 ATP5OP48047 213 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 PLK1P53350 603 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 KDSRQ06136 332 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 MESP2Q0VG99 397 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 GALNT2Q10471 571 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 SNX1Q13596 522 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 DMC1Q14565 340 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 GEN1Q17RS7 908 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 NUDT18Q6ZVK8 323 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 ATG4AQ8WYN0 398 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 EXOC4Q96A65 974 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 NECAB3Q96P71 396 aaPredicted RBP17.81■□□□□ 0.44
SGCE-206ENST00000445866 LGMNQ99538 433 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 ACE2Q9BYF1 805 aaPredicted RBP17.81■□□□□ 0.44
SGCE-206ENST00000445866 HOMER3Q9NSC5 361 aa17.81■□□□□ 0.44
SGCE-206ENST00000445866 IPO11Q9UI26 975 aaKnown RBP17.81■□□□□ 0.44
SGCE-206ENST00000445866 INTS6Q9UL03 887 aaKnown RBP17.81■□□□□ 0.44
SGCE-206ENST00000445866 KDELR3O43731 214 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 POLR2EP19388 210 aaKnown RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 GARSP41250 739 aaKnown RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 GRIA2P42262 883 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 SIX1Q15475 284 aaPredicted RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 CCNG2Q16589 344 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 PLEKHG6Q3KR16 790 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 PITRM1Q5JRX3 1037 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 DARS2Q6PI48 645 aaKnown RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 ARHGAP36Q6ZRI8 547 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 KIAA0907Q7Z7F0 614 aaPredicted RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 ATPAF2Q8N5M1 289 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.8■□□□□ 0.44
SGCE-206ENST00000445866 C2orf49Q9BVC5 232 aaPredicted RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 FRMD8P1Q9BZ68 369 aaPredicted RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 BRD8Q9H0E9 1235 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 FBXL21Q9UKT6 434 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 GOLGA6L10A0A0M3HER8 536 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 J3KR12 359 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 PPP1R12AO14974 1030 aaPredicted RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 MCF2LO15068 1137 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 TIMM44O43615 452 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 SNAP91O60641 907 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 KAT7O95251 611 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 APODP05090 189 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 RBP3P10745 1247 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 AP1B1Q10567 949 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 XRCC4Q13426 336 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 NOMO1Q15155 1222 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 WHAMMP3Q1A5X7 153 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 FUT11Q495W5 492 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 MBLAC2Q68D91 279 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 TXNDC11Q6PKC3 985 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 LEKR1Q6ZMV7 388 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 ADIPOR2Q86V24 386 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 UBALD2Q8IYN6 164 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 AHI1Q8N157 1196 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 PRELID2Q8N945 189 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 WFIKKN2Q8TEU8 576 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 TFB1MQ8WVM0 346 aaKnown RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 MAGOHBQ96A72 148 aaKnown RBP17.8■□□□□ 0.44
SGCE-206ENST00000445866 OLFM3Q96PB7 478 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 CIPCQ9C0C6 399 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 ELOVL2Q9NXB9 296 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 DNPEPQ9ULA0 475 aa17.8■□□□□ 0.44
SGCE-206ENST00000445866 CA14Q9ULX7 337 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms