RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 RBM12Q9NTZ6 932 aaKnown RBP15.48■□□□□ 0.07
CCNE1-203ENST00000444983 KIAA1522Q9P206 1035 aaPredicted RBP15.48■□□□□ 0.07
CCNE1-203ENST00000444983 INTS6Q9UL03 887 aaKnown RBP15.48■□□□□ 0.07
CCNE1-203ENST00000444983 DNPEPQ9ULA0 475 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 SLC27A6Q9Y2P4 619 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 CCDC188H7C350 402 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 MAFKO60675 156 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 TULP3O75386 442 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 MX2P20592 715 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 MZF1P28698 734 aaPredicted RBP15.48■□□□□ 0.07
CCNE1-203ENST00000444983 ACVRL1P37023 503 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 OPRD1P41143 372 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 PAPOLAP51003 745 aaKnown RBP15.48■□□□□ 0.07
CCNE1-203ENST00000444983 OXCT1P55809 520 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 CKAP4Q07065 602 aaKnown RBP15.48■□□□□ 0.07
CCNE1-203ENST00000444983 PPIDQ08752 370 aaKnown RBP15.48■□□□□ 0.07
CCNE1-203ENST00000444983 NR1H3Q13133 447 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 SERINC3Q13530 473 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 SLC12A1Q13621 1099 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 TTC27Q6P3X3 843 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 ARHGAP36Q6ZRI8 547 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 PHTF2Q8N3S3 785 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 CCDC33Q8N5R6 958 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 DNASE1L2Q92874 299 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 HMCESQ96FZ2 354 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 LGMNQ99538 433 aa15.48■□□□□ 0.07
CCNE1-203ENST00000444983 MIA3Q5JRA6 1907 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 TRIM24O15164 1050 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 ZMPSTE24O75844 475 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 PEX11BO96011 259 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 RHOCP08134 193 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 RBP3P10745 1247 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 EIF2DP41214 584 aaKnown RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 CSKP41240 450 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 EIF3EP60228 445 aaKnown RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 MESP2Q0VG99 397 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 TDGQ13569 410 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 BYSLQ13895 437 aaKnown RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 PDK1Q15118 436 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 PRKD1Q15139 912 aaPredicted RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 RNF219Q5W0B1 726 aaPredicted RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 ZC3H18Q86VM9 953 aaKnown RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 NAT16Q8N8M0 369 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 OR7D4Q8NG98 312 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 FATE1Q969F0 183 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 ASB2Q96Q27 587 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 XPO6Q96QU8 1125 aaKnown RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 BRD8Q9H0E9 1235 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 USP29Q9HBJ7 922 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 SLC2A4RGQ9NR83 387 aa15.47■□□□□ 0.07
CCNE1-203ENST00000444983 DRG1Q9Y295 367 aaKnown RBP15.47■□□□□ 0.07
CCNE1-203ENST00000444983 A0A0A0MRY4 1105 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 GOLGA6L10A0A0M3HER8 536 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 CXorf51AA0A1B0GTR3 108 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 BCLAF3A2AJT9 711 aaKnown RBP15.46■□□□□ 0.07
CCNE1-203ENST00000444983 ARHGAP42A6NI28 874 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 HACD1B0YJ81 288 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 NARSO43776 548 aaKnown RBP15.46■□□□□ 0.07
CCNE1-203ENST00000444983 PHF2O75151 1096 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 ITGAVP06756 1048 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 CCNCP24863 283 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 ETFBP38117 255 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 SLC6A11P48066 632 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 PLEKHG6Q3KR16 790 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 ADIPOR2Q86V24 386 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 APCDD1Q8J025 514 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 TTC8Q8TAM2 541 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 LRRN4Q8WUT4 740 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 QKIQ96PU8 341 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCNE1-203ENST00000444983 PDFQ9HBH1 243 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 ABCB8Q9NUT2 735 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 PCYOX1Q9UHG3 505 aa15.46■□□□□ 0.07
CCNE1-203ENST00000444983 SHROOM3Q8TF72 1996 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 SHISA7A6NL88 538 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 DFFAO00273 331 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 PPP1R12AO14974 1030 aaPredicted RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 MCF2LO15068 1137 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 KDELR3O43731 214 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 CD160O95971 181 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 SRFP11831 508 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 CHRNA3P32297 505 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 COILP38432 576 aaPredicted RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 FNTAP49354 379 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 DGKGP49619 791 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 SLC45A4Q5BKX6 768 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 TMEM215Q68D42 235 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 NAIF1Q69YI7 327 aaPredicted RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 CCDC117Q8IWD4 279 aaPredicted RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 CEP112Q8N8E3 955 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 TFB1MQ8WVM0 346 aaKnown RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 SLCO2A1Q92959 643 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 MAGOHBQ96A72 148 aaKnown RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 DDX47Q9H0S4 455 aaKnown RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 DNAJC17Q9NVM6 304 aaKnown RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 IPO11Q9UI26 975 aaKnown RBP15.45■□□□□ 0.06
CCNE1-203ENST00000444983 GGA2Q9UJY4 613 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 F5P12259 2224 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 TRIOO75962 3097 aa15.45■□□□□ 0.06
CCNE1-203ENST00000444983 J3KR12 359 aa15.44■□□□□ 0.06
CCNE1-203ENST00000444983 PRAMEF11O60813 436 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms