RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 SLC11A1P49279 550 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 TBX4P57082 545 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 NAPEPLDQ6IQ20 393 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 FUT10Q6P4F1 479 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 PACS1Q6VY07 963 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 TIFABQ6ZNK6 161 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 RASSF3Q86WH2 238 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.97□□□□□ -0.17
RBM39-216ENST00000444878 FITM2Q8N6M3 262 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 PTPRN2Q92932 1015 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 ZNF669Q96BR6 464 aaPredicted RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 APOL2Q9BQE5 337 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 SLC39A8Q9C0K1 460 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 MARCH5Q9NX47 278 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 MKS1Q9NXB0 559 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 UBP1Q9NZI7 540 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 MPP6Q9NZW5 540 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 HCSTQ9UBK5 93 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 TRIM17Q9Y577 477 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 USH1CQ9Y6N9 552 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 NT5C1B-RDH14C9J2C7 533 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 PSMD3O43242 534 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 ATP9BO43861 1147 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 PQBP1O60828 265 aaKnown RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 SOAT2O75908 522 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 MYCP01106 439 aaPredicted RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 ERVK-10P10266 1014 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 ALDH3A1P30838 453 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 NPY2RP49146 381 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 VEGFBP49765 207 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 MLLT6P55198 1093 aaPredicted RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 NRG1Q02297 640 aaPredicted RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 EFEMP1Q12805 493 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 ELAVL2Q12926 359 aaKnown RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 SMAD1Q15797 465 aaKnown RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 MGAT5BQ3V5L5 792 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 FBXW10Q5XX13 1052 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 OTOP3Q7RTS5 596 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 C14orf80Q86SX3 495 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 NPAS4Q8IUM7 802 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 CNTD1Q8N815 330 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 RTL3Q8N8U3 475 aaKnown RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 SLC39A13Q96H72 371 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 C1orf74Q96LT6 269 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 TSSK1BQ9BXA7 367 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 MRPL9Q9BYD2 267 aaKnown RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 NDFIP2Q9NV92 336 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 IL1RAPL1Q9NZN1 696 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 MAGED2Q9UNF1 606 aaPredicted RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 SLC27A5Q9Y2P5 690 aa13.97□□□□□ -0.17
RBM39-216ENST00000444878 MRPL42Q9Y6G3 142 aaKnown RBP13.97□□□□□ -0.17
RBM39-216ENST00000444878 AP3B1O00203 1094 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 MAFKO60675 156 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 USP1O94782 785 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 RTN3O95197 1032 aaPredicted RBP13.96□□□□□ -0.17
RBM39-216ENST00000444878 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.17
RBM39-216ENST00000444878 BGNP21810 368 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 CRHR1P34998 444 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 GPR17Q13304 367 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 GALNTL6Q49A17 601 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 CERCAMQ5T4B2 595 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 PIK3R6Q5UE93 754 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 ZNF449Q6P9G9 518 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 LINC00523Q86TU6 105 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 TMEM135Q86UB9 458 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.96□□□□□ -0.17
RBM39-216ENST00000444878 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 SPPL2BQ8TCT7 592 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 FCRL3Q96P31 734 aaPredicted RBP13.96□□□□□ -0.17
RBM39-216ENST00000444878 SEPT5Q99719 369 aaPredicted RBP13.96□□□□□ -0.17
RBM39-216ENST00000444878 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 UNC93B1Q9H1C4 597 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 NPHS2Q9NP85 383 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 IL37Q9NZH6 218 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 AAR2Q9Y312 384 aaKnown RBP13.96□□□□□ -0.17
RBM39-216ENST00000444878 PSAT1Q9Y617 370 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 MICAL3Q7RTP6 2002 aa13.96□□□□□ -0.17
RBM39-216ENST00000444878 MAGEB16A2A368 324 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 MTMR11A4FU01 709 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 MATN3O15232 486 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 GALTP07902 379 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 PBX3P40426 434 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 PDE1BQ01064 536 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 CDH17Q12864 832 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 SETDB1Q15047 1291 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 TIGD7Q6NT04 549 aaPredicted RBP13.96□□□□□ -0.18
RBM39-216ENST00000444878 PACS2Q86VP3 889 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 IL12RB2Q99665 862 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 TLR8Q9NR97 1041 aaKnown RBP13.96□□□□□ -0.18
RBM39-216ENST00000444878 CLIC5Q9NZA1 410 aa13.96□□□□□ -0.18
RBM39-216ENST00000444878 FAM92AA1XBS5 289 aa13.95□□□□□ -0.18
RBM39-216ENST00000444878 H7C4K7 107 aa13.95□□□□□ -0.18
RBM39-216ENST00000444878 CACNG3O60359 315 aa13.95□□□□□ -0.18
RBM39-216ENST00000444878 NEBLO76041 1014 aa13.95□□□□□ -0.18
RBM39-216ENST00000444878 ITGA2BP08514 1039 aa13.95□□□□□ -0.18
RBM39-216ENST00000444878 TPH1P17752 444 aa13.95□□□□□ -0.18
RBM39-216ENST00000444878 GP5P40197 560 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms