RNA–Protein interactions for RNA: ENST00000442942.6

UBXN11-210, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-210ENST00000442942 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
UBXN11-210ENST00000442942 A0A0D9SEW6 157 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 ILVBLA1L0T0 632 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 ZNF217O75362 1048 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 RNF8O76064 485 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 C7P10643 843 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 RHOQP17081 205 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 VASPP50552 380 aaPredicted RBP14.03□□□□□ -0.16
UBXN11-210ENST00000442942 SEMA3BQ13214 749 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 ELF2Q15723 593 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 HNRNPA1L2Q32P51 320 aaKnown RBP14.03□□□□□ -0.16
UBXN11-210ENST00000442942 C6orf118Q5T5N4 469 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 PMS2CLQ68D20 193 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 RWDD4Q6NW29 188 aaKnown RBP14.03□□□□□ -0.16
UBXN11-210ENST00000442942 CYP4V2Q6ZWL3 525 aaPredicted RBP14.03□□□□□ -0.16
UBXN11-210ENST00000442942 METTL3Q86U44 580 aaKnown RBP14.03□□□□□ -0.16
UBXN11-210ENST00000442942 NLRP14Q86W24 1093 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 TC2NQ8N9U0 490 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 DCAF4L2Q8NA75 395 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 OR2T3Q8NH03 318 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 SIPA1Q96FS4 1042 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 MRFAP1L1Q96HT8 127 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 PEBP4Q96S96 227 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 PSMB7Q99436 277 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 NUP85Q9BW27 656 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 RETREG1Q9H6L5 497 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 FBRSQ9HAH7 460 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 CD93Q9NPY3 652 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 TMEM248Q9NWD8 314 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 USP36Q9P275 1121 aaKnown RBP14.03□□□□□ -0.16
UBXN11-210ENST00000442942 MBD1Q9UIS9 605 aaPredicted RBP14.03□□□□□ -0.16
UBXN11-210ENST00000442942 GMEB2Q9UKD1 530 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 DOCK9Q9BZ29 2069 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 DCHS1Q96JQ0 3298 aa14.03□□□□□ -0.16
UBXN11-210ENST00000442942 IGHV1OR15-9A0A0B4J2B8 117 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 TTC34A8MYJ7 566 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 AKR1B10O60218 316 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 SIN3BO75182 1162 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 LRCH4O75427 683 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 RHOBTB1O94844 696 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 RETP07949 1114 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 MIPP30301 263 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 NNMTP40261 264 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 MAPKAPK2P49137 400 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 ACAP1Q15027 740 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 C9orf64Q5T6V5 341 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 ZNF783Q6ZMS7 281 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 CACUL1Q86Y37 369 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 OR7D4Q8NG98 312 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 FRS2Q8WU20 508 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 PRCCQ92733 491 aaPredicted RBP14.02□□□□□ -0.17
UBXN11-210ENST00000442942 LOXL4Q96JB6 756 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 CCDC42Q96M95 316 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 NCAPGQ9BPX3 1015 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 SNRNP25Q9BV90 132 aaKnown RBP14.02□□□□□ -0.17
UBXN11-210ENST00000442942 C2orf49Q9BVC5 232 aaPredicted RBP14.02□□□□□ -0.17
UBXN11-210ENST00000442942 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 NHEJ1Q9H9Q4 299 aaPredicted RBP14.02□□□□□ -0.17
UBXN11-210ENST00000442942 NDFIP2Q9NV92 336 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 GPATCH2LQ9NWQ4 482 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 PCSK1NQ9UHG2 260 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 VPS51Q9UID3 782 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 SLC25A13Q9UJS0 675 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 ANAPC7Q9UJX3 599 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 CYP8B1Q9UNU6 501 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 AP4E1Q9UPM8 1137 aa14.02□□□□□ -0.17
UBXN11-210ENST00000442942 CNOT1A5YKK6 2376 aaKnown RBP14.02□□□□□ -0.17
UBXN11-210ENST00000442942 EDDM13A0A1B0GTR0 161 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 ATP9BO43861 1147 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 CREB3O43889 395 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 PRPSAP2O60256 369 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 SNAP91O60641 907 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 EPN2O95208 641 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 H2AFZP0C0S5 128 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 EPHB2P29323 1055 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 PCK1P35558 622 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 KRT83P78385 493 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 GNA12Q03113 381 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 PIGHQ14442 188 aaPredicted RBP14.01□□□□□ -0.17
UBXN11-210ENST00000442942 ERMARDQ5T6L9 678 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 DAB2IPQ5VWQ8 1189 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 SLC36A4Q6YBV0 504 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 H2AFVQ71UI9 128 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 SH2D3CQ8N5H7 860 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 NIPA2Q8N8Q9 360 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 CTNNBL1Q8WYA6 563 aaPredicted RBP14.01□□□□□ -0.17
UBXN11-210ENST00000442942 PTPRN2Q92932 1015 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 BTBD6Q96KE9 485 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 EPAS1Q99814 870 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 RSPH9Q9H1X1 276 aaPredicted RBP14.01□□□□□ -0.17
UBXN11-210ENST00000442942 ITM2CQ9NQX7 267 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 SPTLC3Q9NUV7 552 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 IP6K2Q9UHH9 426 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 DNAI1Q9UI46 699 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 USP18Q9UMW8 372 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 HS3ST2Q9Y278 367 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 SHROOM3Q8TF72 1996 aa14.01□□□□□ -0.17
UBXN11-210ENST00000442942 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms