RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 SLC26A9Q7LBE3 791 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 PASD1Q8IV76 773 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 TBC1D3Q8IZP1 549 aaPredicted RBP11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 OR8D1Q8WZ84 308 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 ALG14Q96F25 216 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 SERAC1Q96JX3 654 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 FEM1AQ9BSK4 669 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 RRN3Q9NYV6 651 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 DKK4Q9UBT3 224 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 FTSJ1Q9UET6 329 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 SLC25A13Q9UJS0 675 aa11.97□□□□□ -0.49
UBE2D4-204ENST00000440899 KNTC1P50748 2209 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 TLR4O00206 839 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 FOXN3O00409 490 aaPredicted RBP11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 SLC7A4O43246 635 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 LATO43561 262 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 ATP9BO43861 1147 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 CLDN11O75508 207 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 ITGAVP06756 1048 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 NUDT1P36639 197 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 ARRB1P49407 418 aaPredicted RBP11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 NUMBP49757 651 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 BPIFB4P59827 614 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 UBE2HP62256 183 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 SLC6A3Q01959 620 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 CENPCQ03188 943 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 NME3Q13232 169 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 SMAD1Q15797 465 aaKnown RBP11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 CAMK4Q16566 473 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 ACCSLQ4AC99 568 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 FAM183BPQ6ZVS7 135 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 PRPF39Q86UA1 669 aaKnown RBP11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 GATAD2AQ86YP4 633 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 ZDHHC17Q8IUH5 632 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 MLKLQ8NB16 471 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 C1orf131Q8NDD1 294 aaKnown RBP11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 ZNF397Q8NF99 534 aaPredicted RBP11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 MDM1Q8TC05 714 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 FAM131CQ96AQ9 280 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 SYNCQ9H7C4 482 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 TMEM51Q9NW97 253 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 DNAJC12Q9UKB3 198 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 VANGL2Q9ULK5 521 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 TBC1D30Q9Y2I9 924 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 GPSM3Q9Y4H4 160 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 OR51B4Q9Y5P0 310 aa11.96□□□□□ -0.49
UBE2D4-204ENST00000440899 PLXNB3Q9ULL4 1909 aa11.96□□□□□ -0.5
UBE2D4-204ENST00000440899 TRABD2BA6NFA1 517 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 M0QYT0 321 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 WNT9AO14904 365 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 MCF2LO15068 1137 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 ALOX15BO15296 676 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 RTN2O75298 545 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 PAGE1O75459 146 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 DAB1O75553 588 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 LDOC1O95751 146 aaPredicted RBP11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 ERBB2P04626 1255 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 CDK4P11802 303 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 CLCN1P35523 988 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 CDH4P55283 916 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 PPP2CBP62714 309 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 PPP2CAP67775 309 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 DLG2Q15700 870 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 C5orf22Q49AR2 442 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 PTPN20Q4JDL3 420 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 CCDC157Q569K6 752 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 NAPEPLDQ6IQ20 393 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 DHRS13Q6UX07 377 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 IQCHQ86VS3 1027 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 OXR1Q8N573 874 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 MFSD2AQ8NA29 543 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 SAP25Q8TEE9 199 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 SIK2Q9H0K1 926 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 WDCPQ9H6R7 721 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 ERVMER34-1Q9H9K5 563 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 SIX2Q9NPC8 291 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 VPS28Q9UK41 221 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 SARDHQ9UL12 918 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 PPM1HQ9ULR3 514 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 DMTF1Q9Y222 760 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 PCDHGA1Q9Y5H4 931 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 HS3ST4Q9Y661 456 aa11.95□□□□□ -0.5
UBE2D4-204ENST00000440899 E9PAM4 449 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 C1QTNF3-AMACRE9PGA6 284 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 PLK4O00444 970 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 ENC1O14682 589 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 MAGEC1O60732 1142 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 F9P00740 461 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 C1SP09871 688 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 ZNF18P17022 549 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 RXRGP48443 463 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 CXCR3P49682 368 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 IRAK1P51617 712 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 METAP1P53582 386 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms