RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	ARMCX3	Q9UH62	379 aa	Predicted RBP	16.74	■□□□□ 0.27
LAMB1-205	ENST00000439976	CA5B	Q9Y2D0	317 aa		16.74	■□□□□ 0.27
LAMB1-205	ENST00000439976	CEP83	Q9Y592	693 aa		16.74	■□□□□ 0.27
LAMB1-205	ENST00000439976	TEX51	A0A1B0GUA7	166 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	SLC7A4	O43246	635 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	VASP	P50552	380 aa	Predicted RBP	16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	PLK1	P53350	603 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	OVGP1	Q12889	678 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	ZNF211	Q13398	564 aa	Predicted RBP	16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	RNF219	Q5W0B1	726 aa	Predicted RBP	16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	PRPF39	Q86UA1	669 aa	Known RBP	16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	CHSY1	Q86X52	802 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	CIR1	Q86X95	450 aa	Predicted RBP	16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	CCDC117	Q8IWD4	279 aa	Predicted RBP	16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	CCAR2	Q8N163	923 aa	Known RBP	16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	TMEM145	Q8NBT3	493 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	OR52K2	Q8NGK3	314 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	NT5C1B	Q96P26	610 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	PPM1H	Q9ULR3	514 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	DMTF1	Q9Y222	760 aa		16.73	■□□□□ 0.27
LAMB1-205	ENST00000439976	TENM4	Q6N022	2769 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	COL6A6	A6NMZ7	2263 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	GIMD1	P0DJR0	217 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	PDGFRA	P16234	1089 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	NUDT1	P36639	197 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	TAS2R38	P59533	333 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	CCDC173	Q0VFZ6	552 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	CNTN1	Q12860	1018 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	SLC12A1	Q13621	1099 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	ZNF658	Q5TYW1	1059 aa	Predicted RBP	16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	ARHGEF19	Q8IW93	802 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	PPM1K	Q8N3J5	372 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	FAM149B1	Q96BN6	582 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	BTN2A3P	Q96KV6	586 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	SLC4A5	Q9BY07	1137 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	TJP2	Q9UDY2	1190 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	PCDHB1	Q9Y5F3	818 aa		16.72	■□□□□ 0.27
LAMB1-205	ENST00000439976	TDRD6	O60522	2096 aa	Known RBP	16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	KCNU1	A8MYU2	1149 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	ATP9B	O43861	1147 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	TRUB2	O95900	331 aa	Known RBP	16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	MT-CO3	P00414	261 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	APOE	P02649	317 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	ACTN2	P35609	894 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	IRAK1	P51617	712 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	SULT2A1	Q06520	285 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	POM121L1P	Q3SYA9	428 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	CDCP2	Q5VXM1	449 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	DENND1B	Q6P3S1	775 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	KDM7A	Q6ZMT4	941 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	RRAGA	Q7L523	313 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	SPATA20	Q8TB22	786 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	HIC2	Q96JB3	615 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	KREMEN1	Q96MU8	473 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	TSG101	Q99816	390 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	UCKL1	Q9NWZ5	548 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	CNTN6	Q9UQ52	1028 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976	OR51B4	Q9Y5P0	310 aa		16.71	■□□□□ 0.27
LAMB1-205	ENST00000439976		F5H5T6	163 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	PRAMEF26	H0Y7S4	382 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	SART1	O43290	800 aa	Known RBP	16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	MAGEC1	O60732	1142 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	DGKA	P23743	735 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	NNMT	P40261	264 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	CXADR	P78310	365 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	E2F1	Q01094	437 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	GCNT1	Q02742	428 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	LRRC63	Q05C16	580 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	STAT4	Q14765	748 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	TAF5	Q15542	800 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	FBXL22	Q6P050	247 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	ZNF605	Q86T29	641 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	OR4C6	Q8NH72	309 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	OR8D1	Q8WZ84	308 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	METTL14	Q9HCE5	456 aa	Known RBP	16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	ST7	Q9NRC1	585 aa		16.7	■□□□□ 0.26
LAMB1-205	ENST00000439976	COL27A1	Q8IZC6	1860 aa	Predicted RBP	16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	LY6G6E	A0A0G2JKS1	128 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976		A0A1B0GVM2	712 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	TCAF2	A6NFQ2	919 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976		E5RJQ4	531 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	RNF103	O00237	685 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	MCF2L	O15068	1137 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	CTSL	P07711	333 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	ACADSB	P45954	432 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	CENPC	Q03188	943 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	KCNH2	Q12809	1159 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	SETMAR	Q53H47	684 aa	Predicted RBP	16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	PIP5KL1	Q5T9C9	394 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	FAM46C	Q5VWP2	391 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976		Q6ZVU0	165 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	DSG4	Q86SJ6	1040 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	TMEM110	Q86TL2	294 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	FMR1NB	Q8N0W7	255 aa	Predicted RBP	16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	STK32A	Q8WU08	396 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	ERCC4	Q92889	916 aa	Predicted RBP	16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	KLHDC7B	Q96G42	594 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	GSDMA	Q96QA5	445 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	FEM1A	Q9BSK4	669 aa		16.69	■□□□□ 0.26
LAMB1-205	ENST00000439976	POPDC2	Q9HBU9	364 aa		16.69	■□□□□ 0.26

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms