RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SFNP31947 248 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 GRIA4P48058 902 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 SERPINB9P50453 376 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 GSTM4Q03013 218 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 BTG3Q14201 252 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-204ENST00000438964 CYP2A13Q16696 494 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 DGKDQ16760 1214 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 CCDC14Q49A88 953 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 MAP1SQ66K74 1059 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-204ENST00000438964 HEATR6Q6AI08 1181 aaKnown RBP13.65□□□□□ -0.22
ACTN1-204ENST00000438964 STYK1Q6J9G0 422 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 NANOGP8Q6NSW7 305 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 SLC7A5P1Q8MH63 180 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 SLC4A11Q8NBS3 891 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 NDRG1Q92597 394 aaKnown RBP13.65□□□□□ -0.22
ACTN1-204ENST00000438964 SLC35B4Q969S0 331 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 FBXL20Q96IG2 436 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 SLC2A11Q9BYW1 496 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 PLGRKTQ9HBL7 147 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 DCDC2Q9UHG0 476 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 PCDHB12Q9Y5F1 795 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 CDY2AQ9Y6F7 541 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
ACTN1-204ENST00000438964 ATP6AP2A0A1C7CYW4 349 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 G3V2L1 256 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 H3BNH8 94 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ATP6AP2O75787 350 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 NCAM1P13591 858 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 GRK2P25098 689 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 GNL1P36915 607 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PTGER2P43116 358 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 HARS2P49590 506 aaKnown RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PLCL1Q15111 1095 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ANO4Q32M45 955 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 GLRA4Q5JXX5 417 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 LRRC8EQ6NSJ5 796 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ZBTB49Q6ZSB9 765 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 LZTR1Q8N653 840 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 COLGALT1Q8NBJ5 622 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 OR52K1Q8NGK4 314 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 CYGBQ8WWM9 190 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 LPGAT1Q92604 370 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 CDKL2Q92772 493 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 MFSD3Q96ES6 412 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 CPB2Q96IY4 423 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 HAUS8Q9BT25 410 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 XYLT2Q9H1B5 865 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 SACM1LQ9NTJ5 587 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 FUOMA2VDF0 154 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 NEMP2A6NFY4 417 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ITGB3P05106 788 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 GLDCP23378 1020 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF143P52747 638 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PFKPQ01813 784 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PPP1R3AQ16821 1122 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 AARS2Q5JTZ9 985 aaKnown RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 SEL1L3Q68CR1 1132 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 SLC7A3Q8WY07 619 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 LZICQ8WZA0 190 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 EGFL7Q9UHF1 273 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 COPG1Q9Y678 874 aaKnown RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ACOT8O14734 319 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PSAPP07602 524 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 NFICP08651 508 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PORP16435 677 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 TFEBP19484 476 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 TRAF2Q12933 501 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ITGADQ13349 1161 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PMS2P3Q13401 168 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 CARTPTQ16568 116 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 AMHR2Q16671 573 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 C6orf183Q5T699 404 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF280DQ6N043 979 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 HMBOX1Q6NT76 420 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 TMEM53Q6P2H8 277 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 CENPSQ8N2Z9 138 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 GABPB2Q8TAK5 448 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-204ENST00000438964 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ARNTL2Q8WYA1 636 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 ATG4CQ96DT6 458 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 MUC3BQ9H195 1237 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 CYP4F12Q9HCS2 524 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 PCDH12Q9NPG4 1184 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 MKS1Q9NXB0 559 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 THEGQ9P2T0 379 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
ACTN1-204ENST00000438964 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-204ENST00000438964 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
ACTN1-204ENST00000438964 SERPINB7O75635 380 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 KCNA2P16389 499 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 GOT1P17174 413 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 HOXD12P35452 270 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 EIF2B2P49770 351 aaKnown RBP13.63□□□□□ -0.23
ACTN1-204ENST00000438964 PLK1P53350 603 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms