RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RAXQ9Y2V3 346 aa18.71■□□□□ 0.59
GTF3A-204ENST00000438571 SNX10Q9Y5X0 201 aa18.71■□□□□ 0.59
GTF3A-204ENST00000438571 HS3ST4Q9Y661 456 aa18.71■□□□□ 0.59
GTF3A-204ENST00000438571 ITPR1Q14643 2758 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 RTN2O75298 545 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 ADH1BP00325 375 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 GOT1P17174 413 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 CD38P28907 300 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 PLK1P53350 603 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 NME3Q13232 169 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 CAMK2BQ13554 666 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 AUHQ13825 339 aaKnown RBP18.7■□□□□ 0.58
GTF3A-204ENST00000438571 ELAVL3Q14576 367 aaKnown RBP18.7■□□□□ 0.58
GTF3A-204ENST00000438571 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.7■□□□□ 0.58
GTF3A-204ENST00000438571 RNF34Q969K3 372 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 FAM131CQ96AQ9 280 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 KIAA1468Q9P260 1216 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 BAHCC1Q9P281 2608 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 FTSJ1Q9UET6 329 aa18.7■□□□□ 0.58
GTF3A-204ENST00000438571 RNF103O00237 685 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 HSF2BPO75031 334 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 DAB1O75553 588 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 CNTN5O94779 1100 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 ABCB4P21439 1286 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 MAT2AP31153 395 aaKnown RBP18.69■□□□□ 0.58
GTF3A-204ENST00000438571 CCR1P32246 355 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 CLCN1P35523 988 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 CCR5P51681 352 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 SLC12A1Q13621 1099 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 COL9A2Q14055 689 aaPredicted RBP18.69■□□□□ 0.58
GTF3A-204ENST00000438571 EXOC3L4Q17RC7 722 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 COL28A1Q2UY09 1125 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 RABGAP1LQ5R372 815 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 Q6ZVU0 165 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 SLC47A2Q86VL8 602 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 SERAC1Q96JX3 654 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 CAAP1Q9H8G2 361 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 TMPRSS4Q9NRS4 437 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 ASNSD1Q9NWL6 643 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 ARHGAP20Q9P2F6 1191 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 CA5BQ9Y2D0 317 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 OR51B4Q9Y5P0 310 aa18.69■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3DA0A087WVF3 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3IA0A087WXS9 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3EA0A087X179 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3KA0A087X1G2 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3FA6NER0 549 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TRABD2BA6NFA1 517 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3LB9A6J9 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 PAGE1O75459 146 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 FGFR1OPO95684 399 aaKnown RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 GLI1P08151 1106 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3HP0C7X1 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 EPHA8P29322 1005 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 NXPH1P58417 271 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 BNIP3Q12983 259 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 SMAD1Q15797 465 aaKnown RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 ALFQ53S48 1182 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 EFHC1Q5JVL4 640 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TTC39BQ5VTQ0 682 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 AGBL4Q5VU57 503 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3GQ6DHY5 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3CQ6IPX1 549 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 DPY19L2P1Q6NXN4 242 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 C11orf57Q6ZUT1 292 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 SPATS2Q86XZ4 545 aaKnown RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 TBC1D3Q8IZP1 549 aaPredicted RBP18.68■□□□□ 0.58
GTF3A-204ENST00000438571 SAP25Q8TEE9 199 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 SPAG5Q96R06 1193 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 PSMB7Q99436 277 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 PIGVQ9NUD9 493 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 SLC12A6Q9UHW9 1150 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 DNAJC12Q9UKB3 198 aa18.68■□□□□ 0.58
GTF3A-204ENST00000438571 LRRK1Q38SD2 2015 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 M0QYT0 321 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 FOXN3O00409 490 aaPredicted RBP18.67■□□□□ 0.58
GTF3A-204ENST00000438571 LATO43561 262 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 PLRG1O43660 514 aaKnown RBP18.67■□□□□ 0.58
GTF3A-204ENST00000438571 ATP9BO43861 1147 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 BNIP3LO60238 219 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 SNAP91O60641 907 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 ADCY5O95622 1261 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 CTSLP07711 333 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 NNMTP40261 264 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 MTIF2P46199 727 aaKnown RBP18.67■□□□□ 0.58
GTF3A-204ENST00000438571 SLC6A3Q01959 620 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 CYP4F3Q08477 520 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 CNTN1Q12860 1018 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 ACCSLQ4AC99 568 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 HSP90AA4PQ58FG1 418 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 SLC26A9Q7LBE3 791 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 EID2Q8N6I1 236 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 PIP4K2CQ8TBX8 421 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 CNDP2Q96KP4 475 aaKnown RBP18.67■□□□□ 0.58
GTF3A-204ENST00000438571 FEM1AQ9BSK4 669 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 SIK2Q9H0K1 926 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 GDF3Q9NR23 364 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 SLC25A13Q9UJS0 675 aa18.67■□□□□ 0.58
GTF3A-204ENST00000438571 ATRXP46100 2492 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms