RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CCDC13Q8IYE1 715 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 RUBCNQ92622 972 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 HMCESQ96FZ2 354 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 P2RY11Q96G91 374 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 PCDH9Q9HC56 1237 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 THG1LQ9NWX6 298 aaKnown RBP23.56■■□□□ 1.36
CPSF4-204ENST00000436336 MTSS1O43312 755 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 IFNB1P01574 187 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 KCNA5P22460 613 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 SMAD4Q13485 552 aaKnown RBP23.56■■□□□ 1.36
CPSF4-204ENST00000436336 CDH18Q13634 790 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 SKIV2LQ15477 1246 aaKnown RBP23.56■■□□□ 1.36
CPSF4-204ENST00000436336 ELF2Q15723 593 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 TIGD7Q6NT04 549 aaPredicted RBP23.56■■□□□ 1.36
CPSF4-204ENST00000436336 OTOP3Q7RTS5 596 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 TMEM25Q86YD3 366 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 MFN1Q8IWA4 741 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 ARHGEF2Q92974 986 aaKnown RBP23.56■■□□□ 1.36
CPSF4-204ENST00000436336 ELSPBP1Q96BH3 223 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 MARK1Q9P0L2 795 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 UQCRHLA0A096LP55 91 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 GRXCR2A6NFK2 248 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 BHMG1C9JSJ3 638 aaPredicted RBP23.55■■□□□ 1.36
CPSF4-204ENST00000436336 MAFKO60675 156 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 PENKP01210 267 aaPredicted RBP23.55■■□□□ 1.36
CPSF4-204ENST00000436336 UQCRHP07919 91 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 ETFBP38117 255 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 GUCY2DQ02846 1103 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 EML3Q32P44 896 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 VITQ6UXI7 678 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 ARHGAP36Q6ZRI8 547 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 MFSD6LQ8IWD5 586 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 GLIS1Q8NBF1 620 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 OR52K2Q8NGK3 314 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 DEPDC1BQ8WUY9 529 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 BHMTQ93088 406 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 EPB41L5Q9HCM4 733 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 PLK2Q9NYY3 685 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 EPS15L1Q9UBC2 864 aa23.55■■□□□ 1.36
CPSF4-204ENST00000436336 IPO11Q9UI26 975 aaKnown RBP23.55■■□□□ 1.36
CPSF4-204ENST00000436336 ZSCAN5CA6NGD5 496 aaPredicted RBP23.54■■□□□ 1.36
CPSF4-204ENST00000436336 FCHO2Q0JRZ9 810 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 SERINC3Q13530 473 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 TRIP13Q15645 432 aaPredicted RBP23.54■■□□□ 1.36
CPSF4-204ENST00000436336 KCTD19Q17RG1 926 aaPredicted RBP23.54■■□□□ 1.36
CPSF4-204ENST00000436336 P3H1Q32P28 736 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 LY6G5CQ5SRR4 150 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 DUPD1Q68J44 220 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 SEC14L1Q92503 715 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 BBS2Q9BXC9 721 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 ASIC3Q9UHC3 531 aa23.54■■□□□ 1.36
CPSF4-204ENST00000436336 C5orf60A6NFR6 353 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 MBTPS2O43462 519 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 STK10O94804 968 aaKnown RBP23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ETS1P14921 441 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ACTN2P35609 894 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 OXCT1P55809 520 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 RHBDF2Q6PJF5 856 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 MTSS1LQ765P7 747 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 PRUNE1Q86TP1 453 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ZNF354CQ86Y25 554 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 IFT20Q8IY31 132 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ZNF557Q8N988 423 aaPredicted RBP23.53■■□□□ 1.36
CPSF4-204ENST00000436336 FIBINQ8TAL6 211 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 FATE1Q969F0 183 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 GDF3Q9NR23 364 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 MYO18AQ92614 2054 aaKnown RBP23.53■■□□□ 1.36
CPSF4-204ENST00000436336 A0A0D9SEW6 157 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 NEDD8-MDP1E9PL57 170 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ECI2O75521 394 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 GCATO75600 419 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 NFATC1O95644 943 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 TUBBP07437 444 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ZSCAN5DPP0CG00 497 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ACVRL1P37023 503 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 DRG2P55039 364 aaKnown RBP23.53■■□□□ 1.36
CPSF4-204ENST00000436336 PDGFRLQ15198 375 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 DHCR24Q15392 516 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 ANO4Q32M45 955 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 FSCBQ5H9T9 825 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 RNF219Q5W0B1 726 aaPredicted RBP23.53■■□□□ 1.36
CPSF4-204ENST00000436336 PPM1EQ8WY54 764 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 PNKPQ96T60 521 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 HINFPQ9BQA5 517 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 FAM83CQ9BQN1 747 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 SP110Q9HB58 689 aa23.53■■□□□ 1.36
CPSF4-204ENST00000436336 MATN3O15232 486 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 TYRP14679 529 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 PSMC3P17980 439 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 CLCN6P51797 869 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 IL10RBQ08334 325 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 TRIM68Q6AZZ1 485 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 IL31Q6EBC2 164 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 WDR93Q6P2C0 686 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 PARM1Q6UWI2 310 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 C4orf22Q6V702 233 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 YAF2Q8IY57 180 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 OR7D4Q8NG98 312 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 WFDC5Q8TCV5 224 aa23.52■■□□□ 1.36
CPSF4-204ENST00000436336 FGF14Q92915 247 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms