RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 GNA15P30679 374 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 NUDT1P36639 197 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ARRB1P49407 418 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 IRAK1P51617 712 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CENPCQ03188 943 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OVGP1Q12889 678 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PAK1Q13153 545 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 DNAJC3Q13217 504 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TAF5Q15542 800 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 C5orf22Q49AR2 442 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OTUD1Q5VV17 481 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ISM2Q6H9L7 571 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 KLHL10Q6JEL2 608 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FBXL22Q6P050 247 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TRIM65Q6PJ69 517 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OLFML1Q6UWY5 402 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 OXR1Q8N573 874 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MFSD2AQ8NA29 543 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 NXPE2Q96DL1 559 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CRELD1Q96HD1 420 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 AASDHPPTQ9NRN7 309 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PPM1HQ9ULR3 514 aa11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 URB1O60287 2271 aaKnown RBP11.28□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GOLGA6L4A6NEF3 574 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ALOX15BO15296 676 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 HSF2BPO75031 334 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC2A3P11169 496 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ABCB4P21439 1286 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CCR1P32246 355 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 HNF1BP35680 557 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 OXCT1P55809 520 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CLDN6P56747 220 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TAS2R38P59533 333 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 MTA1Q13330 715 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ILKQ13418 452 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PIP5KL1Q5T9C9 394 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 HES3Q5TGS1 186 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CACTIN-AS1Q8N1I8 211 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ATP6V0D2Q8N8Y2 350 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SHC3Q92529 594 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 LRIG1Q96JA1 1093 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 FEM1AQ9BSK4 669 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 FAM204AQ9H8W3 233 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 UBE2TQ9NPD8 197 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DDIT4Q9NX09 232 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PCDHGC3Q9UN70 934 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DMTF1Q9Y222 760 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 HS3ST2Q9Y278 367 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D30Q9Y2I9 924 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NBEAQ8NFP9 2946 aa11.27□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NYNRINQ9P2P1 1898 aaKnown RBP11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 I6L893 689 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 MCF2LO15068 1137 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 THAP12O43422 761 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 RTN2O75298 545 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DAB1O75553 588 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 LDOC1O95751 146 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NNMTP40261 264 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NUMBP49757 651 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 STX17P56962 302 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CDK17Q00537 523 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CNTN1Q12860 1018 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 AUHQ13825 339 aaKnown RBP11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 RTP5Q14D33 572 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PROX2Q3B8N5 592 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CCDC157Q569K6 752 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC45A4Q5BKX6 768 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 RABGAP1LQ5R372 815 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ARTNQ5T4W7 220 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 C6orf118Q5T5N4 469 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 GJB7Q6PEY0 223 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 Q6ZVU0 165 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC26A9Q7LBE3 791 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DSG4Q86SJ6 1040 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ZNF683Q8IZ20 524 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DEFB106AQ8N104 65 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SH2D3CQ8N5H7 860 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 EID2Q8N6I1 236 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SNIP1Q8TAD8 396 aaKnown RBP11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 OR8D1Q8WZ84 308 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 FAM81BQ96LP2 452 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 RPRD1AQ96P16 312 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NRSN2Q9GZP1 204 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PREBQ9HCU5 417 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ANLNQ9NQW6 1124 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 APEX2Q9UBZ4 518 aa11.26□□□□□ -0.61
SPTLC1P4-201ENST00000435997 GOLGA4Q13439 2230 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3DA0A087WVF3 549 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3IA0A087WXS9 549 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3EA0A087X179 549 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms