RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 BBC3Q96PG8 261 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 EYA3Q99504 573 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 NUDT16L1Q9BRJ7 211 aaKnown RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 SDF4Q9BRK5 362 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 HERC2P3Q9BVR0 1158 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CTDSP1Q9GZU7 261 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 ENTPD7Q9NQZ7 604 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 EIF2B3Q9NR50 452 aaKnown RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 MPP6Q9NZW5 540 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 TLK1Q9UKI8 766 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CAMK2AQ9UQM7 478 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 KAT6BQ8WYB5 2073 aa4.9□□□□□ -1.62
HMGB1P45-201ENST00000435986 DYTNA2CJ06 578 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 C16orf96A6NNT2 1141 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 TARM1B6A8C7 271 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 NARSO43776 548 aaKnown RBP4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 KAT7O95251 611 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ACADMP11310 421 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 UBL4AP11441 157 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ARSAP15289 507 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 TNFRSF1AP19438 455 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 CHRNA5P30532 468 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 GJC1P36383 396 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 CTCFP49711 727 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF84P51523 738 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 EIF4A2Q14240 407 aaKnown RBP4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 KPNB1Q14974 876 aaKnown RBP4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF766Q5HY98 468 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 TMEM268Q5VZI3 342 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 GJB7Q6PEY0 223 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 B4GALNT4Q76KP1 1039 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 IGFN1Q86VF2 1251 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 NGEFQ8N5V2 710 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 C11orf65Q8NCR3 313 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 DNAAF1Q8NEP3 725 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZMIZ2Q8NF64 920 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 NEU4Q8WWR8 484 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 RUFY2Q8WXA3 655 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 HSPH1Q92598 858 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 PIGKQ92643 395 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 KAZALD1Q96I82 304 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ADAD1Q96M93 576 aaKnown RBP4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 CHCHD6Q9BRQ6 235 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 HDHD5Q9BXW7 423 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ARHGAP39Q9C0H5 1083 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 CCDC68Q9H2F9 335 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 EPHX3Q9H6B9 360 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 SYNCQ9H7C4 482 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 SLC22A11Q9NSA0 550 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 ARL15Q9NXU5 204 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 TBC1D14Q9P2M4 693 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 SLC25A10Q9UBX3 287 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 FBXO40Q9UH90 709 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 DTX4Q9Y2E6 619 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 PKP3Q9Y446 797 aa4.9□□□□□ -1.63
HMGB1P45-201ENST00000435986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 TEX13CA0A0J9YWL9 993 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 GRID2IPA4D2P6 1211 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 DPPA5A6NC42 116 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 OR6C68A6NDL8 312 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 FAM90A7PA6NKC0 464 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 FAM90A22PA8MWA6 464 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 FAM90A12PA8MX19 464 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 FAM90A23PA8MXZ1 464 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 GTPBP1O00178 669 aaKnown RBP4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 MATN3O15232 486 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 USO1O60763 962 aaKnown RBP4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 GCP02774 474 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 IRF1P10914 325 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 ALOX12P18054 663 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 RPS6KB1P23443 525 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 ITPKBP27987 946 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 ABCD1P33897 745 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 CCT4P50991 539 aaKnown RBP4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 CYP2J2P51589 502 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 SLC12A2P55011 1212 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 PTP4A2Q12974 167 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 MTA1Q13330 715 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 SLC14A1Q13336 389 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 GAB1Q13480 694 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 TDGQ13569 410 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 IL13RA2Q14627 380 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 KCTD2Q14681 263 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 EDRF1Q3B7T1 1238 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 KRBA2Q6ZNG9 492 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 GSTA5Q7RTV2 222 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 ADSSL1Q8N142 457 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 PDILTQ8N807 584 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 RAB40AQ8WXH6 277 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 ATP2A3Q93084 1043 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 SMARCE1Q969G3 411 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 P2RY11Q96G91 374 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF747Q9BV97 191 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 PHF7Q9BWX1 381 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 PRDM13Q9H4Q3 707 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 ASIC5Q9NY37 505 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 TTLL3Q9Y4R7 772 aa4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 SETD1BQ9UPS6 1966 aaKnown RBP4.89□□□□□ -1.63
HMGB1P45-201ENST00000435986 POLR2AP24928 1970 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms