RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 RFX2P48378 723 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 ENTPD1P49961 510 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 CYP2J2P51589 502 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 RHAGQ02094 409 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 BRD3Q15059 726 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 UBAP2Q5T6F2 1119 aaKnown RBP3.7□□□□□ -1.82
CLK1-204ENST00000432425 C1orf228Q6PIY5 440 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 Q6ZTK2 550 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.7□□□□□ -1.82
CLK1-204ENST00000432425 MYLK4Q86YV6 388 aaPredicted RBP3.7□□□□□ -1.82
CLK1-204ENST00000432425 CAMK1DQ8IU85 385 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 FAM110DQ8TAY7 271 aaPredicted RBP3.7□□□□□ -1.82
CLK1-204ENST00000432425 ZNF479Q96JC4 524 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 PIGSQ96S52 555 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 RMDN3Q96TC7 470 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 NPAS1Q99742 590 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 CRB3Q9BUF7 120 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 ARHGAP39Q9C0H5 1083 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 MAGEH1Q9H213 219 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 ACTR5Q9H9F9 607 aaPredicted RBP3.7□□□□□ -1.82
CLK1-204ENST00000432425 SEPSECSQ9HD40 501 aaKnown RBP3.7□□□□□ -1.82
CLK1-204ENST00000432425 DACT1Q9NYF0 836 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 NCKIPSDQ9NZQ3 722 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 DAPP1Q9UN19 280 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 PCDHA7Q9UN72 937 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 LZTS1Q9Y250 596 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 INSL5Q9Y5Q6 135 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 SLC4A4Q9Y6R1 1079 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 TCRBV7S3A2A0A539 114 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 GRM8O00222 908 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 HEXIM1O94992 359 aaKnown RBP3.69□□□□□ -1.82
CLK1-204ENST00000432425 TGFB3P10600 412 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 PRPH2P23942 346 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 GSTM2P28161 218 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 RASSF2P50749 326 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 ZXDBP98169 803 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 ROR2Q01974 943 aaKnown RBP3.69□□□□□ -1.82
CLK1-204ENST00000432425 CDK18Q07002 472 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 GALNTL6Q49A17 601 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 TTC22Q5TAA0 569 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 FAM171A1Q5VUB5 890 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 KIAA1324Q6UXG2 1013 aaKnown RBP3.69□□□□□ -1.82
CLK1-204ENST00000432425 SLC16A12Q6ZSM3 486 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 CTU1Q7Z7A3 348 aaKnown RBP3.69□□□□□ -1.82
CLK1-204ENST00000432425 FAM217AQ8IXS0 508 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 TMEM217Q8N7C4 229 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 GABPB2Q8TAK5 448 aaPredicted RBP3.69□□□□□ -1.82
CLK1-204ENST00000432425 SLC2A12Q8TD20 617 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 KCNJ9Q92806 393 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 MIB2Q96AX9 1013 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 HDHD5Q9BXW7 423 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 PRDM8Q9NQV8 689 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 TMLHEQ9NVH6 421 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 PLK2Q9NYY3 685 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 CNTNAP2Q9UHC6 1331 aa3.69□□□□□ -1.82
CLK1-204ENST00000432425 ACKR2O00590 384 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 HNRNPRO43390 633 aaKnown RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 HLA-DQA2P01906 255 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 PKMP14618 531 aaKnown RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 ZBTB16Q05516 673 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 GALNT1Q10472 559 aaPredicted RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 ALKBH1Q13686 389 aaKnown RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 BLMHQ13867 455 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 GPR18Q14330 331 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 OTUD1Q5VV17 481 aaPredicted RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 DGAT2L7PQ6IED9 249 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 SULT6B1Q6IMI4 303 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 ADHFE1Q8IWW8 467 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 IQCF1Q8N6M8 205 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 CMASQ8NFW8 434 aaPredicted RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 SCAMP5Q8TAC9 235 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 WASF1Q92558 559 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 ARRDC3Q96B67 414 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 LTV1Q96GA3 475 aaPredicted RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 FRMD8Q9BZ67 464 aaPredicted RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 TRIM31Q9BZY9 425 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 DCLK3Q9C098 648 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 B3GNT4Q9C0J1 378 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 PABPC3Q9H361 631 aaKnown RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 PLAC1Q9HBJ0 212 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 PLCB1Q9NQ66 1216 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 MYO6Q9UM54 1294 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 TRBV5-7A0A0A0MS05 114 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 TMEM247A6NEH6 219 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 SAC3D1A6NKF1 404 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 F5H423 210 aaPredicted RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 CCNT1O60563 726 aaKnown RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 CSTBP04080 98 aaKnown RBP3.68□□□□□ -1.82
CLK1-204ENST00000432425 ARSBP15848 533 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 TNFSF8P32971 234 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 KRTAP10-9P60411 292 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 PLK5Q496M5 336 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 C5orf22Q49AR2 442 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 ZNF585BQ52M93 769 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 VWA5B1Q5TIE3 1220 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 SYNE3Q6ZMZ3 975 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 CADM3Q8N126 398 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 VPS52Q8N1B4 723 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 LRRC57Q8N9N7 239 aa3.68□□□□□ -1.82
CLK1-204ENST00000432425 TRAPPC9Q96Q05 1148 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms