RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ADRA1DP25100 572 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 OR1D2P34982 312 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 SMAD1Q15797 465 aaKnown RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 CES3Q6UWW8 571 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 SH2D5Q6ZV89 423 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 ATP6V0D2Q8N8Y2 350 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 SPOCK2Q92563 424 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 IGSF21Q96ID5 467 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 APOL2Q9BQE5 337 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 PRDM5Q9NQX1 630 aaPredicted RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 WASH4PA8MWX3 477 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 C2CD2LO14523 706 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 LPXNO60711 386 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 OAS1P00973 400 aaKnown RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 NEK3P51956 506 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 CORO7P57737 925 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 SLC18A2Q05940 514 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 NIPAL4Q0D2K0 466 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 PDK4Q16654 411 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 SLC8B1Q6J4K2 584 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 MARK2Q7KZI7 788 aaKnown RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 TFAP2DQ7Z6R9 452 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 TMCO2Q7Z6W1 182 aaPredicted RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 CCNJLQ8IV13 435 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 RNF168Q8IYW5 571 aaPredicted RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 DNAAF3Q8N9W5 541 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 NAT9Q9BTE0 207 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 NOL6Q9H6R4 1146 aaKnown RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 TMEM39AQ9NV64 488 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 TMEM51Q9NW97 253 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 COMMD8Q9NX08 183 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 TM9SF1O15321 606 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 SNX3O60493 162 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 ZDHHC11BP0C7U3 371 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 PAPOLAP51003 745 aaKnown RBP19.98■□□□□ 0.79
VRK2-205ENST00000432057 RNF187Q5TA31 235 aaPredicted RBP19.98■□□□□ 0.79
VRK2-205ENST00000432057 RAP1GAP2Q684P5 730 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 CGB2Q6NT52 195 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 FAM47EQ6ZV65 393 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 DNAJC5GQ8N7S2 189 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 TTC17Q96AE7 1141 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 BTN2A3PQ96KV6 586 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 IL12RB2Q99665 862 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 LRRC40Q9H9A6 602 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 IL1RAPL1Q9NZN1 696 aa19.98■□□□□ 0.79
VRK2-205ENST00000432057 GOLGA6L7A0A1B0GV03 622 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 MATN3O15232 486 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 KRT38O76015 456 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 CNTN5O94779 1100 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 IGLV3-27P01718 113 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 DNAJC3Q13217 504 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 PRPSAP1Q14558 356 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 SEPT7Q16181 437 aaKnown RBP19.97■□□□□ 0.79
VRK2-205ENST00000432057 ALFQ53S48 1182 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 SPOUT1Q5T280 376 aaKnown RBP19.97■□□□□ 0.79
VRK2-205ENST00000432057 LGSNQ5TDP6 509 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 C1orf53Q5VUE5 145 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 FAM117BQ6P1L5 589 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 CYS1Q717R9 158 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 SPATA22Q8NHS9 363 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 ZYG11BQ9C0D3 744 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 BFARQ9NZS9 450 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 RPS6KL1Q9Y6S9 549 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 OBSL1O75147 1896 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 PLXNA4Q9HCM2 1894 aa19.97■□□□□ 0.79
VRK2-205ENST00000432057 HMX2A2RU54 273 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 TLR5O60602 858 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 RFPL1O75677 317 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 HLA-DQB2P05538 268 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 POLBP06746 335 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 RHOQP17081 205 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 ITIH4Q14624 930 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 SPANXN3Q5MJ09 141 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 CERCAMQ5T4B2 595 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 YTHDF3Q7Z739 585 aaKnown RBP19.96■□□□□ 0.79
VRK2-205ENST00000432057 RASSF3Q86WH2 238 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 ANKS4BQ8N8V4 417 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 IGSF8Q969P0 613 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 ZNF669Q96BR6 464 aaPredicted RBP19.96■□□□□ 0.79
VRK2-205ENST00000432057 FCRL3Q96P31 734 aaPredicted RBP19.96■□□□□ 0.79
VRK2-205ENST00000432057 TTLL2Q9BWV7 592 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 GLOD4Q9HC38 313 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 PCDH10Q9P2E7 1040 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 BACE2Q9Y5Z0 518 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 CHD5Q8TDI0 1954 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 MYO1CO00159 1063 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 CACNG3O60359 315 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 ALADP13716 330 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 SERPINB9P50453 376 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 MROH9Q5TGP6 573 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 KIAA1841Q6NSI8 718 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 TIGD7Q6NT04 549 aaPredicted RBP19.96■□□□□ 0.79
VRK2-205ENST00000432057 RGS9BPQ6ZS82 235 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 KLHDC8BQ8IXV7 354 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 LRRC8CQ8TDW0 803 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 UBE2OQ9C0C9 1292 aaKnown RBP19.96■□□□□ 0.79
VRK2-205ENST00000432057 TMEM248Q9NWD8 314 aa19.96■□□□□ 0.79
VRK2-205ENST00000432057 PPARGC1AQ9UBK2 798 aaKnown RBP19.96■□□□□ 0.79
VRK2-205ENST00000432057 IGLV3-10A0A075B6K4 115 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms