RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 FAM124AQ86V42 546 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 TRIM69Q86WT6 500 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 GRAMD1CQ8IYS0 662 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 SPATA20Q8TB22 786 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 SORCS1Q8WY21 1168 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 SNX19Q92543 992 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 LRIG1Q96JA1 1093 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 CNDP2Q96KP4 475 aaKnown RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 BTN2A3PQ96KV6 586 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 MRGPRX3Q96LB0 322 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 CEP63Q96MT8 703 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 SPAG5Q96R06 1193 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 MED15Q96RN5 788 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 FAM129BQ96TA1 746 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 NEUROG2Q9H2A3 272 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 EVA1BQ9NVM1 165 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 ARMCX3Q9UH62 379 aaPredicted RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 SFMBT1Q9UHJ3 866 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
CDH13-203ENST00000431540 BTBD3Q9Y2F9 522 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 CHD5Q8TDI0 1954 aa8.57□□□□□ -1.04
CDH13-203ENST00000431540 PRAMEF26H0Y7S4 382 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 MCF2LO15068 1137 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 MED7O43513 233 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 SIN3BO75182 1162 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 CD70P32970 193 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 CSKP41240 450 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 ACADVLP49748 655 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 NXPH1P58417 271 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 CDH18Q13634 790 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 GOLGA7BQ2TAP0 167 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 PITRM1Q5JRX3 1037 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 RNF219Q5W0B1 726 aaPredicted RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 PMF1Q6P1K2 205 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 NCEH1Q6PIU2 408 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 XKR5Q6UX68 686 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 TMEM110Q86TL2 294 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 HSCBQ8IWL3 235 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 DCBLD1Q8N8Z6 715 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 SNRNP27Q8WVK2 155 aaKnown RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 ERCC4Q92889 916 aaPredicted RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 PTPRN2Q92932 1015 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 SLC35C1Q96A29 364 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 DHTKD1Q96HY7 919 aaPredicted RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 ZNF578Q96N58 590 aaPredicted RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 THAP9Q9H5L6 903 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 RETREG1Q9H6L5 497 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 PREBQ9HCU5 417 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 ASNSD1Q9NWL6 643 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 NCKIPSDQ9NZQ3 722 aa8.56□□□□□ -1.04
CDH13-203ENST00000431540 INTS6Q9UL03 887 aaKnown RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 ASH1LQ9NR48 2969 aaKnown RBP8.56□□□□□ -1.04
CDH13-203ENST00000431540 SETXQ7Z333 2677 aaKnown RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 NEMP2A6NFY4 417 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 PLRG1O43660 514 aaKnown RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 ATP9BO43861 1147 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 RNASEH2AO75792 299 aaKnown RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 SMC2O95347 1197 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 GNA14O95837 355 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 APOEP02649 317 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 CD19P15391 556 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 EPHA8P29322 1005 aaPredicted RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 SLC6A4P31645 630 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 MLLT3P42568 568 aaPredicted RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 GPD2P43304 727 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 DUSP3P51452 185 aaPredicted RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 NDUFA8P51970 172 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 ERVPABLB-1P60509 514 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 YWHAZP63104 245 aaKnown RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 NUCB2P80303 420 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 RHDQ02161 417 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 STIM1Q13586 685 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 KCNJ12Q14500 433 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 STAT4Q14765 748 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 SHBQ15464 509 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 C5orf22Q49AR2 442 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 SETMARQ53H47 684 aaPredicted RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 HS1BP3Q53T59 392 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 KCNT1Q5JUK3 1230 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 DHRS13Q6UX07 377 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 ENOSF1Q7L5Y1 443 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 KANSL1Q7Z3B3 1105 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 GPR155Q7Z3F1 870 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 ATP6V0D2Q8N8Y2 350 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 FAM181AQ8N9Y4 354 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 TMIEQ8NEW7 156 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 GANCQ8TET4 914 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 EDEM1Q92611 657 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 ELMO3Q96BJ8 720 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 EEF2KMTQ96G04 330 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 SERAC1Q96JX3 654 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 FCRL2Q96LA5 508 aaPredicted RBP8.55□□□□□ -1.04
CDH13-203ENST00000431540 NT5C1BQ96P26 610 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 DUSP23Q9BVJ7 150 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
CDH13-203ENST00000431540 DPH1Q9BZG8 443 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms