RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PER2O15055 1255 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 EXOC3O60645 756 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 CENPBP07199 599 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 HNRNPCP07910 306 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 CHRM5P08912 532 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 NHLRC4P0CG21 123 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 UBL4AP11441 157 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 PRKCHP24723 683 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 TYK2P29597 1187 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 ARL1P40616 181 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 POLD2P49005 469 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 CDH15P55291 814 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 COL10A1Q03692 680 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC18A3Q16572 532 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 FAM69AQ5T7M9 428 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 AADACL2Q6P093 401 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC30A9Q6PML9 568 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 VSTM1Q6UX27 236 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 RNF144BQ7Z419 303 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 PRRT2Q7Z6L0 340 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 PXKQ7Z7A4 578 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 ADGRG6Q86SQ4 1221 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 LDLRAD3Q86YD5 345 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 RHPN2Q8IUC4 686 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 C16orf71Q8IYS4 520 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 PLD5Q8N7P1 536 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 FAM98AQ8NCA5 519 aaKnown RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 KCNJ9Q92806 393 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 FRG2BQ96QU4 278 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 EYA3Q99504 573 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 NPLQ9BXD5 320 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 ITPAQ9BY32 194 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 NUAK2Q9H093 628 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC25A18Q9H1K4 315 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 MUC13Q9H3R2 512 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 EPHX3Q9H6B9 360 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 TTC12Q9H892 705 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 TFCP2L1Q9NZI6 479 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 KCND2Q9NZV8 630 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC17A6Q9P2U8 582 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 PACSIN3Q9UKS6 424 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 SUFUQ9UMX1 484 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 MYRFQ9Y2G1 1151 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 PIAS3Q9Y6X2 628 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 RUSC2Q8N2Y8 1516 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 EMSYQ7Z589 1322 aa3.43□□□□□ -1.86
HMGB1P27-201ENST00000431429 C17orf113A0A1B0GUU1 675 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 DOK2O60496 412 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 ZBED4O75132 1171 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 RPS6KB1P23443 525 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 ICAM3P32942 547 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 MCM7P33993 719 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 PLA2G5P39877 138 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 STAT1P42224 750 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 VPS41P49754 854 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 OAZ1P54368 228 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 DRG2P55039 364 aaKnown RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 TFF2Q03403 129 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 PKP1Q13835 747 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 EIF4A2Q14240 407 aaKnown RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 IL13RA2Q14627 380 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 KCTD2Q14681 263 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 KPNB1Q14974 876 aaKnown RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 TBCEQ15813 527 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 PROSER3Q2NL68 480 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 PLK5Q496M5 336 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 AWAT1Q58HT5 328 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 ZNF667Q5HYK9 610 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 KIAA1755Q5JYT7 1200 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 HAUS3Q68CZ6 603 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 TMEM65Q6PI78 240 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 RANBP10Q6VN20 620 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 B4GALNT4Q76KP1 1039 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 TICAM2Q86XR7 235 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 DIS3L2Q8IYB7 885 aaKnown RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 METTL6Q8TCB7 284 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 WIPF2Q8TF74 440 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 NEU4Q8WWR8 484 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 PERPQ96FX8 193 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 C5orf34Q96MH7 638 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 BARD1Q99728 777 aaKnown RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 TRIM31Q9BZY9 425 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 GHITMQ9H3K2 345 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 SMYD2Q9NRG4 433 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 SEMA4GQ9NTN9 838 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 ALKBH4Q9NXW9 302 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 NSMCE4AQ9NXX6 385 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 CLIC5Q9NZA1 410 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 MPP6Q9NZW5 540 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 ARPP21Q9UBL0 812 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 HSPB7Q9UBY9 170 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 PSAT1Q9Y617 370 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 AOX1Q06278 1338 aa3.42□□□□□ -1.86
HMGB1P27-201ENST00000431429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 FSD2A1L4K1 749 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 TMEM191CA6NGB0 347 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 TSPAN4O14817 238 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 TIMM44O43615 452 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms