RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 SIN3BO75182 1162 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 ZBED1O96006 694 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 HLA-DRAP01903 254 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 ZNF18P17022 549 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 C5AR1P21730 350 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 ACP1P24666 158 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 SLC8A1P32418 973 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 CSRP3P50461 194 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 TKTL1P51854 596 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 YWHAEP62258 255 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 CCDC15Q0P6D6 951 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 OCLNQ16625 522 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 HNRNPA1L2Q32P51 320 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 ZSCAN23Q3MJ62 389 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 ZNF394Q53GI3 561 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 KCNT1Q5JUK3 1230 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 ADGRF1Q5T601 910 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 FAM46CQ5VWP2 391 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 TMC6Q7Z403 805 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 SCD5Q86SK9 330 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 C12orf56Q8IXR9 622 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 CCDC116Q8IYX3 515 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 CEP57L1Q8IYX8 460 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 CACTIN-AS1Q8N1I8 211 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 CARNMT1Q8N4J0 409 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 DCBLD1Q8N8Z6 715 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 TPCN2Q8NHX9 752 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 MAPK15Q8TD08 544 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 PARD3BQ8TEW8 1205 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 SYNDIG1Q9H7V2 258 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 POLR1BQ9H9Y6 1135 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 SLC39A2Q9NP94 309 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 SEPT3Q9UH03 358 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 DMTF1Q9Y222 760 aa8.13□□□□□ -1.11
ECHDC1-207ENST00000430841 PIEZO2Q9H5I5 2752 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 TARSL2A2RTX5 802 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 HHLA1C9JL84 531 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 C1QTNF3-AMACRE9PGA6 284 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 TGFB1I1O43294 461 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 CALUO43852 315 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 CSO75390 466 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ASS1P00966 412 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 GOT1P17174 413 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 MAT2AP31153 395 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ASPAP45381 313 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ADPRHP54922 357 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 INCA1Q0VD86 236 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 NFATC3Q12968 1075 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ZNF211Q13398 564 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ZACNQ401N2 412 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 C3orf38Q5JPI3 329 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 TMEM215Q68D42 235 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 SPOPLQ6IQ16 392 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 IQCHQ86VS3 1027 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ARL14Q8N4G2 192 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 MFSD2AQ8NA29 543 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 KLHDC7BQ96G42 594 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 CCDC114Q96M63 670 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ZNF396Q96N95 335 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 CALN1Q9BXU9 219 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 NEUROG2Q9H2A3 272 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 USP29Q9HBJ7 922 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 DYRK4Q9NR20 520 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 ABCC13Q9NSE7 274 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 NCKIPSDQ9NZQ3 722 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 DCTN4Q9UJW0 460 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 CLEC4EQ9ULY5 219 aa8.12□□□□□ -1.11
ECHDC1-207ENST00000430841 PTPN13Q12923 2485 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 PRAMEF26H0Y7S4 382 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 IKBKBO14920 756 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 SIGLEC6O43699 453 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 STX10O60499 249 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 PRMT3O60678 531 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 VNN1O95497 513 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 APOEP02649 317 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 C4BPAP04003 597 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 NR3C1P04150 777 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 WNT1P04628 370 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 SRPRAP08240 638 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 CD19P15391 556 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 AKT2P31751 481 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 CD70P32970 193 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 CSKP41240 450 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 RXRGP48443 463 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 LSSP48449 732 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 VAMP7P51809 220 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 ECT2LQ008S8 904 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 EHHADHQ08426 723 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 ADIGQ0VDE8 80 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 BNIP3Q12983 259 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 ELAVL3Q14576 367 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 AGERQ15109 404 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 TRIP4Q15650 581 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms