RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SERAC1Q96JX3 654 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 TMEM51Q9NW97 253 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 RRN3Q9NYV6 651 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 GTF3C3Q9Y5Q9 886 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 SYNJ2BP-COX16A0A087WUM0 186 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3DA0A087WVF3 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3IA0A087WXS9 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3EA0A087X179 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3KA0A087X1G2 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3FA6NER0 549 aaPredicted RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3LB9A6J9 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 C1QTNF3-AMACRE9PGA6 284 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 PLRG1O43660 514 aaKnown RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 ATP9BO43861 1147 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 MAGEC1O60732 1142 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 GADD45BO75293 160 aaPredicted RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 ITGAVP06756 1048 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 C1SP09871 688 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3HP0C7X1 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 EPHA8P29322 1005 aaPredicted RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 CENPCQ03188 943 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 OVGP1Q12889 678 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 ZNF177Q13360 481 aaPredicted RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 AUHQ13825 339 aaKnown RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 C5orf22Q49AR2 442 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3GQ6DHY5 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3CQ6IPX1 549 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 FAM183BPQ6ZVS7 135 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 IQCHQ86VS3 1027 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TMPRSS12Q86WS5 348 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TRIM69Q86WT6 500 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 CREBRFQ8IUR6 639 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 PASD1Q8IV76 773 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D3Q8IZP1 549 aaPredicted RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 PDCD7Q8N8D1 485 aaKnown RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 MFSD2AQ8NA29 543 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 C1orf131Q8NDD1 294 aaKnown RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 ZNF397Q8NF99 534 aaPredicted RBP15.32■□□□□ 0.04
MSH5-208ENST00000429846 SAP25Q8TEE9 199 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 FEM1AQ9BSK4 669 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 ERVMER34-1Q9H9K5 563 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 COX16Q9P0S2 106 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 DMTF1Q9Y222 760 aa15.32■□□□□ 0.04
MSH5-208ENST00000429846 TLR4O00206 839 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 MCF2LO15068 1137 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 GRAP2O75791 330 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
MSH5-208ENST00000429846 VAV1P15498 845 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 PON1P27169 355 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 NOS2P35228 1153 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 KRT9P35527 623 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 HNF1BP35680 557 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 CDH4P55283 916 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 NXPH1P58417 271 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 PPP2CBP62714 309 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 PPP2CAP67775 309 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 SLC6A3Q01959 620 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 NME3Q13232 169 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 CAMK2BQ13554 666 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 ACCSLQ4AC99 568 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 BRMS1LQ5PSV4 323 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
MSH5-208ENST00000429846 OR6B2Q6IFH4 312 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.31■□□□□ 0.04
MSH5-208ENST00000429846 PRPF39Q86UA1 669 aaKnown RBP15.31■□□□□ 0.04
MSH5-208ENST00000429846 GATAD2AQ86YP4 633 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 ALG14Q96F25 216 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 SYNCQ9H7C4 482 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 SCUBE2Q9NQ36 999 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 VPS28Q9UK41 221 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 VANGL2Q9ULK5 521 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 STAP1Q9ULZ2 295 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 TBC1D30Q9Y2I9 924 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 PAXBP1Q9Y5B6 917 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 HS3ST4Q9Y661 456 aa15.31■□□□□ 0.04
MSH5-208ENST00000429846 M0QYT0 321 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 ENC1O14682 589 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 PAGE1O75459 146 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 RFPL3O75679 317 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 ERBB2P04626 1255 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 MTIF2P46199 727 aaKnown RBP15.3■□□□□ 0.04
MSH5-208ENST00000429846 RXRGP48443 463 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 KNTC1P50748 2209 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 BPIFB4P59827 614 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 UBE2HP62256 183 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 CCDC15Q0P6D6 951 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 ITPR1Q14643 2758 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 SHBQ15464 509 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 PTPN20Q4JDL3 420 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 SETMARQ53H47 684 aaPredicted RBP15.3■□□□□ 0.04
MSH5-208ENST00000429846 DHRS13Q6UX07 377 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 FAM114A1Q8IWE2 563 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 SH2D3CQ8N5H7 860 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 PIP4K2CQ8TBX8 421 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 CNDP2Q96KP4 475 aaKnown RBP15.3■□□□□ 0.04
MSH5-208ENST00000429846 CCDC114Q96M63 670 aa15.3■□□□□ 0.04
MSH5-208ENST00000429846 C2orf49Q9BVC5 232 aaPredicted RBP15.3■□□□□ 0.04
MSH5-208ENST00000429846 PREBQ9HCU5 417 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms