RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 GTF2A2P52657 109 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 RAB15P59190 212 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 SEPT6Q14141 434 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 THOC7Q6I9Y2 204 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 SCYL2Q6P3W7 929 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 FAM196AQ6ZSG2 479 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CYP4V2Q6ZWL3 525 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 SNX31Q8N9S9 440 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 LPGAT1Q92604 370 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 TAMM41Q96BW9 452 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 LRRC39Q96DD0 335 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CGRRF1Q99675 332 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 TARS2Q9BW92 718 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 GATA5Q9BWX5 397 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 POLR3FQ9H1D9 316 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 EFCAB1Q9HAE3 211 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 PRDM16Q9HAZ2 1276 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 SNX15Q9NRS6 342 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 MTMR10Q9NXD2 777 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 TCAF2A6NFQ2 919 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ZNF839A8K0R7 811 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 A8MU76 341 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 G3V2L1 256 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 AQP9O43315 295 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 HDCP19113 662 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CNTFP26441 200 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CNTN2Q02246 1040 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 NIPAL4Q0D2K0 466 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 MOGQ16653 247 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 OFCC1Q8IZS5 231 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 TMEM130Q8N3G9 435 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 STARD8Q92502 1023 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 TFAP2CQ92754 450 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ITPKCQ96DU7 683 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 MSTO1Q9BUK6 570 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 MTMR12Q9C0I1 747 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 MUC3BQ9H195 1237 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ANKEF1Q9NU02 776 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ZNF219Q9P2Y4 722 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 GABBR1Q9UBS5 961 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 SUN2Q9UH99 717 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ERGIC3Q9Y282 383 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 FAM149AA5PLN7 773 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 AKAP10O43572 662 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 KCNH1O95259 989 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 TFE3P19532 575 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 TNFSF9P41273 254 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 MLLT10P55197 1068 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 PSME3P61289 254 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 KCNC4Q03721 635 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 PRKCQQ04759 706 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 TFDP2Q14188 446 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 TRIM16LQ309B1 348 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 EEPD1Q7L9B9 569 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 BTLAQ7Z6A9 289 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 NETO2Q8NC67 525 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 ACDQ96AP0 544 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 EIF2AQ9BY44 585 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 ZNF518BQ9C0D4 1074 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 GIN1Q9NXP7 522 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 ARID2Q68CP9 1835 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 H0YJX3 145 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 GRID2O43424 1007 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 EDN1P05305 212 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 IL4RP24394 825 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 MGAT1P26572 445 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 POLR2BP30876 1174 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 IREB2P48200 963 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 RPS3AP61247 264 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 TRPC3Q13507 836 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 TRIM25Q14258 630 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 PERM1Q5SV97 790 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 FAM102AQ5T9C2 384 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 TRNP1Q6NT89 227 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 HHIPL2Q6UWX4 724 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 LAYNQ6UX15 382 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 DPH6Q7L8W6 267 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 IGFN1Q86VF2 1251 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 RAVER1Q8IY67 606 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 CBR4Q8N4T8 237 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 MCUQ8NE86 351 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 ASB9Q96DX5 294 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 FBXL20Q96IG2 436 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 WNK4Q96J92 1243 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 ILKAPQ9H0C8 392 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 GPRC5DQ9NZD1 345 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 ZDHHC2Q9UIJ5 367 aa11.29□□□□□ -0.6
SEMA4D-209ENST00000429836 GNPTGQ9UJJ9 305 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms