RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SLC7A4O43246 635 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 SIGLEC6O43699 453 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 ACP1P24666 158 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 NUDT1P36639 197 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 DAB2P98082 770 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 TLE3Q04726 772 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 SULT2A1Q06520 285 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 OVGP1Q12889 678 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 TBC1D25Q3MII6 688 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 ZNF658Q5TYW1 1059 aaPredicted RBP18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 FAM46CQ5VWP2 391 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 ZNF605Q86T29 641 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 TRIM62Q9BVG3 475 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 SARDHQ9UL12 918 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 CA5BQ9Y2D0 317 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 TEX51A0A1B0GUA7 166 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 TRIM38O00635 465 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 PLRG1O43660 514 aaKnown RBP18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 PLA2G2AP14555 144 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 ACADSBP45954 432 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 CXADRP78310 365 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 LRRC63Q05C16 580 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 CNTN1Q12860 1018 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 ACCSLQ4AC99 568 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 SETMARQ53H47 684 aaPredicted RBP18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 HS1BP3Q53T59 392 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 RRAGAQ7L523 313 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 TRIM69Q86WT6 500 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 ERICH1Q86X53 443 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 SPACA3Q8IXA5 215 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 CCAR2Q8N163 923 aaKnown RBP18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 CACTIN-AS1Q8N1I8 211 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 ZNF843Q8N446 348 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 ATP6V0D2Q8N8Y2 350 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 FRS2Q8WU20 508 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 COL26A1Q96A83 441 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 FAM131CQ96AQ9 280 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 LGMNQ99538 433 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 SCAND2PQ9GZW5 306 aaPredicted RBP18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 METTL14Q9HCE5 456 aaKnown RBP18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 COL6A6A6NMZ7 2263 aa18.86■□□□□ 0.61
UPK3BP1-201ENST00000428678 PRAMEF26H0Y7S4 382 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 TRUB2O95900 331 aaKnown RBP18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 MT-CO3P00414 261 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 ZNF18P17022 549 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 GPD2P43304 727 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 E2F1Q01094 437 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 CETN1Q12798 172 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 ZNF211Q13398 564 aaPredicted RBP18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 COBLL1Q53SF7 1204 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 RABGAP1LQ5R372 815 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 AGBL4Q5VU57 503 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 BEND5Q7L4P6 421 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 KLHDC7BQ96G42 594 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 MYOCQ99972 504 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 SLC12A6Q9UHW9 1150 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 SLC25A13Q9UJS0 675 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 ZDHHC9Q9Y397 364 aa18.85■□□□□ 0.61
UPK3BP1-201ENST00000428678 PIEZO2Q9H5I5 2752 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 A0A1B0GVM2 712 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 TCAF2A6NFQ2 919 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 KCNU1A8MYU2 1149 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 C1QTNF3-AMACRE9PGA6 284 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 BNIP3LO60238 219 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 RPL34P49207 117 aaKnown RBP18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 OXCT1P55809 520 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 PITX1P78337 314 aaPredicted RBP18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 CCDC40Q4G0X9 1142 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 TTC39BQ5VTQ0 682 aaPredicted RBP18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 DENND1BQ6P3S1 775 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 ARHGEF19Q8IW93 802 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 NAF1Q96HR8 494 aaKnown RBP18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 FAM204AQ9H8W3 233 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 POPDC2Q9HBU9 364 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 PCDHB1Q9Y5F3 818 aa18.84■□□□□ 0.61
UPK3BP1-201ENST00000428678 SYNJ2BP-COX16A0A087WUM0 186 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 E5RJQ4 531 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 PMM2O15305 246 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 SLC31A1O15431 190 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 FFAR2O15552 330 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 THEGLP0DJG4 465 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 KRT5P13647 590 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 PRLRP16471 622 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 DGKAP23743 735 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 PLK1P53350 603 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 YWHAZP63104 245 aaKnown RBP18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 CFHR1Q03591 330 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 KCNH2Q12809 1159 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 DLG2Q15700 870 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 CXorf57Q6NSI4 855 aaKnown RBP18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 Q6ZVU0 165 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 TMC6Q7Z403 805 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 SLC25A45Q8N413 288 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 OR4C6Q8NH72 309 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 KLK6Q92876 244 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 ERCC4Q92889 916 aaPredicted RBP18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 RNF34Q969K3 372 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 GSDMAQ96QA5 445 aa18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 PRMT1Q99873 361 aaKnown RBP18.83■□□□□ 0.6
UPK3BP1-201ENST00000428678 GDPD2Q9HCC8 539 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms