RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ITPK1Q13572 414 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 BBS9Q3SYG4 887 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CYBRD1Q53TN4 286 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 KLHL32Q96NJ5 620 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 C6orf229H3BNL8 230 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 GNAO1P09471 354 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 P4HA1P13674 534 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 EIF3EP60228 445 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 NIPAL4Q0D2K0 466 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CLEC14AQ86T13 490 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 ANKMY2Q8IV38 441 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 DCAF4Q8WV16 495 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 OTUD5Q96G74 571 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TXNDC15Q96J42 360 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 ZMAT2Q96NC0 199 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 CDRT15Q96T59 188 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 LXNQ9BS40 222 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 VPS33BQ9H267 617 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 RSAD1Q9HA92 442 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 SPO11Q9Y5K1 396 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 HEMK1Q9Y5R4 338 aaPredicted RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 PLA2G6O60733 806 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 PIGRP01833 764 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 APRTP07741 180 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CD1EP15812 388 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 IL1R2P27930 398 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 POLR2BP30876 1174 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 ARCN1P48444 511 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 GDF10P55107 478 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 LIN9Q5TKA1 542 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 RIOX2Q8IUF8 465 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 WDTC1Q8N5D0 677 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 HMG20AQ9NP66 347 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 RAB6BQ9NRW1 208 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CCM2LQ9NUG4 571 aaPredicted RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 ZC3H7BQ9UGR2 993 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 DCDC2Q9UHG0 476 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TTC24A2A3L6 582 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 GLRA3O75311 464 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ZNF182P17025 639 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 CD247P20963 164 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 GRM5P41594 1212 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ALDH18A1P54886 795 aaKnown RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 AARS2Q5JTZ9 985 aaKnown RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 XAF1Q6GPH4 301 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 OGFOD2Q6N063 350 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 KIAA1841Q6NSI8 718 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CYHR1Q6ZMK1 362 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PRR23CQ6ZRP0 262 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PPM1NQ8N819 430 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ATP6V1E2Q96A05 226 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TCHPQ9BT92 498 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ADAM33Q9BZ11 813 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CYP26B1Q9NR63 512 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 C1orf112Q9NSG2 853 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 EBF1Q9UH73 591 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 FRMPD2Q68DX3 1309 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 LOC100653049A0A140TA62 436 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ISPDA4D126 451 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 GAS7O60861 476 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 KRT34O76011 436 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 LRP8Q14114 963 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 NFIXQ14938 502 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SPATS1Q496A3 300 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PADI6Q6TGC4 694 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 GPR141Q7Z602 305 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 C4orf19Q8IY42 314 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CPNE9Q8IYJ1 553 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 KDM1BQ8NB78 822 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SLC2A14Q8TDB8 520 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 EGLN2Q96KS0 407 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SLAIN2Q9P270 581 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SEPT3Q9UH03 358 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TIMM22Q9Y584 194 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 FRYLO94915 3013 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SPEGQ15772 3267 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ARHGEF35A5YM69 484 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 FARP2O94887 1054 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 HSD17B4P51659 736 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PRELPP51888 382 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 C16orf89Q6UX73 402 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 KIAA0408Q6ZU52 694 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 KSR1Q8IVT5 923 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TMEM35BQ8NCS4 154 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ABHD11Q8NFV4 315 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CPA5Q8WXQ8 436 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 DRC3Q9H069 523 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 UNC93B1Q9H1C4 597 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 COG4Q9H9E3 785 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 AGPAT4Q9NRZ5 378 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TMEM216Q9P0N5 145 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 DKK3Q9UBP4 350 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SLC9A2Q9UBY0 812 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TESMINQ9Y4I5 508 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TRAF6Q9Y4K3 522 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TMEM131Q92545 1883 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 DYSFO75923 2080 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 POLEQ07864 2286 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 MN1Q10571 1320 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms