RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CALCOCO1Q9P1Z2 691 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 BCCIPQ9P287 314 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 XPO7Q9UIA9 1087 aaKnown RBP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ERVW-1Q9UQF0 538 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 THADAQ6YHU6 1953 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 GOLGA6L7A0A1B0GV03 622 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 TMEM191CA6NGB0 347 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 E9PAM4 449 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 I6L893 689 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 SLC30A4O14863 429 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 FGF10O15520 208 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 TSPAN3O60637 253 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 GRAP2O75791 330 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 ADCY5O95622 1261 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 MOCS2O96007 188 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 ADH1BP00325 375 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 EPHX1P07099 455 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 RFC1P35251 1148 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 MPLP40238 635 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 HCAR3P49019 387 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 HDAC4P56524 1084 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 SEMA3BQ13214 749 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 MAMLD1Q13495 774 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 WDR45BQ5MNZ6 344 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 SYCP2LQ5T4T6 812 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 RNF219Q5W0B1 726 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 ZNF776Q68DI1 518 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 HEATR6Q6AI08 1181 aaKnown RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 RETSATQ6NUM9 610 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 KIAA1211LQ6NV74 962 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 WDR59Q6PJI9 974 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 PRR23CQ6ZRP0 262 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 NLRP14Q86W24 1093 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 CARNMT1Q8N4J0 409 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 WFDC5Q8TCV5 224 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 HMGB4Q8WW32 186 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 IGSF8Q969P0 613 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 CFAP57Q96MR6 1250 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 DNAJC7Q99615 494 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 TSPY26PQ9H489 355 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 PRSS16Q9NQE7 514 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 METTL5Q9NRN9 209 aaKnown RBP9.39□□□□□ -0.91
SMC1A-203ENST00000428014 TMEM248Q9NWD8 314 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 PILRBQ9UKJ0 227 aa9.39□□□□□ -0.91
SMC1A-203ENST00000428014 TNRC6BQ9UPQ9 1833 aaKnown RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 DDX3XO00571 662 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 MCF2LO15068 1137 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 DNTTP04053 509 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 GYPCP04921 128 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 ACADMP11310 421 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 C5AR1P21730 350 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 RRM1P23921 792 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 PRKCHP24723 683 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 TPMTP51580 245 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 LSM11P83369 360 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 DUOXA1Q1HG43 343 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 FNDC3BQ53EP0 1204 aaKnown RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 INO80DQ53TQ3 878 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 FSCBQ5H9T9 825 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 C9orf64Q5T6V5 341 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 FAM46CQ5VWP2 391 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 NEK5Q6P3R8 708 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 DCUN1D2Q6PH85 259 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 ZNF571Q7Z3V5 609 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 VSIG1Q86XK7 387 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 SH2D3CQ8N5H7 860 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 OR8K1Q8NGG5 319 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 FRS2Q8WU20 508 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 FAM172AQ8WUF8 416 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 BHMTQ93088 406 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 ANP32EQ9BTT0 268 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 ACE2Q9BYF1 805 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 MBD1Q9UIS9 605 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-203ENST00000428014 SLC25A13Q9UJS0 675 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 VANGL2Q9ULK5 521 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 NENFQ9UMX5 172 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 NEU3Q9UQ49 428 aa9.38□□□□□ -0.91
SMC1A-203ENST00000428014 WASH3PC4AMC7 463 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 GOLGA8SH3BPF8 625 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 RNF8O76064 485 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 FTLP02792 175 aaPredicted RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 SERPINF2P08697 491 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 TPM1P09493 284 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 ZNF883P0CG24 379 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 GNSP15586 552 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 OR1E1P30953 314 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 ZNF33AQ06730 810 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 SLC14A1Q13336 389 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 HNRNPDQ14103 355 aaKnown RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms