RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TXNDC2Q86VQ3 553 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 MAPKAPK5Q8IW41 473 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SEPT12Q8IYM1 358 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 UNC5BQ8IZJ1 945 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 DCLK2Q8N568 766 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 UBR7Q8N806 425 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAM47BQ8NA70 645 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 BHLHE22Q8NFJ8 381 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 OR13F1Q8NGS4 319 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SETD6Q8TBK2 473 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PHF10Q8WUB8 498 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 C1orf54Q8WWF1 131 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 JPH3Q8WXH2 748 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NKD2Q969F2 451 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NCLNQ969V3 563 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PPWD1Q96BP3 646 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SH3YL1Q96HL8 342 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 VCPIP1Q96JH7 1222 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CLPTM1LQ96KA5 538 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TNIP3Q96KP6 325 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF560Q96MR9 790 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 VPS35Q96QK1 796 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 UHRF1Q96T88 793 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PLIN2Q99541 437 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 LPIN3Q9BQK8 851 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 EMILIN2Q9BXX0 1053 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 MRPL9Q9BYD2 267 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 VPS33BQ9H267 617 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TP63Q9H3D4 680 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNX25Q9H3E2 840 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TUT1Q9H6E5 874 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NOL6Q9H6R4 1146 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 COPS7BQ9H9Q2 264 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC52A2Q9HAB3 445 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SIX2Q9NPC8 291 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 RPRD1BQ9NQG5 326 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNTG2Q9NY99 539 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 DCDC2Q9UHG0 476 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 DENND2AQ9ULE3 1009 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CFL2Q9Y281 166 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRAF6Q9Y4K3 522 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 DCCP43146 1447 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TNS3Q68CZ2 1445 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 EMSYQ7Z589 1322 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ROBO2Q9HCK4 1378 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 A0A1W2PPW3 197 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CLRN2A0PK11 232 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 GOLGA8JA6NMD2 632 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MINDY4BA8MYZ0 360 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 NOP56O00567 594 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYP26A1O43174 497 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 HTRA2O43464 458 aaPredicted RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 LIASO43766 372 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TOM1L1O75674 476 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SEC14L2O76054 403 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 DDHD2O94830 711 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PROSCO94903 275 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ATE1O95260 518 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PDE8BO95263 885 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADH1CP00326 375 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ALBP02768 609 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MYL3P08590 195 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TFPTP0C1Z6 253 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PLA2G4BP0C869 781 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MBL2P11226 248 aaPredicted RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TIMP2P16035 220 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF26P17031 533 aaPredicted RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRKACAP17612 351 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 NCF2P19878 526 aaPredicted RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 GARTP22102 1010 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CXCR2P25025 360 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PSMA4P25789 261 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 GSTM2P28161 218 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TYK2P29597 1187 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 GRM5P41594 1212 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CBX5P45973 191 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 GNPDA1P46926 289 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 KCNJ1P48048 391 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC26A2P50443 739 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADCY7P51828 1080 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 RAB25P57735 213 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYP4F2P78329 520 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MRPS22P82650 360 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYP4F3Q08477 520 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 BNIP2Q12982 314 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 KLF1Q13351 362 aaPredicted RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PPP2R5DQ14738 602 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 STILQ15468 1287 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PTPROQ16827 1216 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MGAT5BQ3V5L5 792 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 LRRC24Q50LG9 513 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TEX44Q53QW1 395 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC27A3Q5K4L6 730 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SAMD4BQ5PRF9 694 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 RNASEH2BQ5TBB1 312 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MOXD1Q6UVY6 613 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 XKR5Q6UX68 686 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ERO1BQ86YB8 467 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms