RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 WDR5P61964 334 aaKnown RBP8.75□□□□□ -1.01
SH3D19-204ENST00000427414 HTRA3P83110 453 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 LAMB3Q13751 1172 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 SLC14A2Q15849 920 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 PSMD5Q16401 504 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 LRRC26Q2I0M4 334 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 TIGD7Q6NT04 549 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-204ENST00000427414 PSRC1Q6PGN9 363 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-204ENST00000427414 HFE2Q6ZVN8 426 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 UNC45BQ8IWX7 931 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 TCEAL8Q8IYN2 117 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 COLGALT1Q8NBJ5 622 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 ZNF461Q8TAF7 563 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 LRRC8CQ8TDW0 803 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 ZFAND2BQ8WV99 257 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 CPT1BQ92523 772 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 CLP1Q92989 425 aaKnown RBP8.75□□□□□ -1.01
SH3D19-204ENST00000427414 SCLYQ96I15 445 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 PWWP2AQ96N64 755 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 SPATA13Q96N96 652 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 SLCO1B3Q9NPD5 702 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.75□□□□□ -1.01
SH3D19-204ENST00000427414 SENP1Q9P0U3 644 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 STOML1Q9UBI4 398 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 CACNG4Q9UBN1 327 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 SCOCQ9UIL1 159 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 ATP11BQ9Y2G3 1177 aa8.75□□□□□ -1.01
SH3D19-204ENST00000427414 PRG3Q9Y2Y8 225 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-204ENST00000427414 PIK3R2O00459 728 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 FGF19O95750 216 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 LMNAP02545 664 aaKnown RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 TFE3P19532 575 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 MAGEA3P43357 314 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 MAGEA4P43358 317 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 VPS41P49754 854 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 NDST2P52849 883 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 CCL23P55773 120 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 UBE3AQ05086 875 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 MMRN1Q13201 1228 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 RCN2Q14257 317 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 TMED2Q15363 201 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 SLC5A9Q2M3M2 681 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 HEATR6Q6AI08 1181 aaKnown RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 IRGCQ6NXR0 463 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 FAM131BQ86XD5 332 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 PDIK1LQ8N165 341 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 HTR3CQ8WXA8 447 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 BTN2A3PQ96KV6 586 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 NMRK1Q9NWW6 199 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 ABI2Q9NYB9 513 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 NINJ2Q9NZG7 142 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 ZMYM5Q9UJ78 669 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 IRAK3Q9Y616 596 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 DRGXA6NNA5 263 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 LILRB3O75022 631 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 RAG1P15918 1043 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 VHLP40337 213 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 MLLT6P55198 1093 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 NAB1Q13506 487 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 HIF1AQ16665 826 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 KHDC1Q4VXA5 237 aaKnown RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 TAF1BQ53T94 588 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 ITPRIPL1Q6GPH6 555 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 VPS52Q8N1B4 723 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 ATP11CQ8NB49 1132 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 STKLD1Q8NE28 680 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 HASPINQ8TF76 798 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 PLD4Q96BZ4 506 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.011e-8■■□□□ 11.8
SH3D19-204ENST00000427414 LBHD1Q9BQE6 289 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 TKTL2Q9H0I9 626 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 SSU72Q9NP77 194 aaKnown RBP8.74□□□□□ -1.01
SH3D19-204ENST00000427414 OR12D3Q9UGF7 316 aa8.74□□□□□ -1.01
SH3D19-204ENST00000427414 SLC38A8A6NNN8 435 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 APOEP02649 317 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 CPB1P15086 417 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 RHOQP17081 205 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 GOT1P17174 413 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 PTPN4P29074 926 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 BTG3Q14201 252 aaPredicted RBP8.73□□□□□ -1.01
SH3D19-204ENST00000427414 KLHL38Q2WGJ6 581 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 PAN2Q504Q3 1202 aaKnown RBP8.73□□□□□ -1.01
SH3D19-204ENST00000427414 PPP6R3Q5H9R7 873 aaPredicted RBP8.73□□□□□ -1.01
SH3D19-204ENST00000427414 RTP2Q5QGT7 225 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 OR52E8Q6IFG1 317 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 PDE12Q6L8Q7 609 aaKnown RBP8.73□□□□□ -1.01
SH3D19-204ENST00000427414 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.73□□□□□ -1.011e-6■■■■□ 19.5
SH3D19-204ENST00000427414 ITIH5Q86UX2 942 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 DPF3Q92784 378 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 FAM136AQ96C01 138 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 TMEM169Q96HH4 297 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 PAWRQ96IZ0 340 aaKnown RBP8.73□□□□□ -1.01
SH3D19-204ENST00000427414 C9orf72Q96LT7 481 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 DDX50Q9BQ39 737 aaKnown RBP8.73□□□□□ -1.01
SH3D19-204ENST00000427414 ETNK2Q9NVF9 386 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 LRCH1Q9Y2L9 728 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 PCDHB12Q9Y5F1 795 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 PAPLNO95428 1278 aa8.73□□□□□ -1.01
SH3D19-204ENST00000427414 VNN2O95498 520 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms