RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SP100P23497 879 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 YWHAHQ04917 246 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 STX3Q13277 289 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 MBTPS1Q14703 1052 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ZNF789Q5FWF6 425 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 CD300LGQ6UXG3 332 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 TTC39CQ8N584 583 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 SCLYQ96I15 445 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 SLC39A8Q9C0K1 460 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 CYP4F12Q9HCS2 524 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ARHGEF3Q9NR81 526 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 SLC45A1Q9Y2W3 748 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 CEP290O15078 2479 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 TRIOO75962 3097 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
PTPRN-204ENST00000423636 B2RBV5 119 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 CHRNGP07510 517 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 BMP1P13497 986 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 CYBAP13498 195 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 PRKCHP24723 683 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 KPNB1Q14974 876 aaKnown RBP12.18□□□□□ -0.46
PTPRN-204ENST00000423636 CNGA3Q16281 694 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 KHDC1Q4VXA5 237 aaKnown RBP12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SERINC5Q86VE9 423 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SLC41A1Q8IVJ1 513 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 RNF148Q8N7C7 305 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 CD99L2Q8TCZ2 262 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SH3RF2Q8TEC5 729 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 RSPH1Q8WYR4 309 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 CERS2Q96G23 380 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 CADM1Q9BY67 442 aaKnown RBP12.18□□□□□ -0.46
PTPRN-204ENST00000423636 WDR55Q9H6Y2 383 aaPredicted RBP12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SUDS3Q9H7L9 328 aaPredicted RBP12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SNX15Q9NRS6 342 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 KCTD3Q9Y597 815 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 FAM159BA6NKW6 160 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 LRPAP1P30533 357 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 LHX1P48742 406 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 EPHB1P54762 984 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SLC25A3Q00325 362 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SLC18A2Q05940 514 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 XKR4Q5GH76 650 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 FAM171A1Q5VUB5 890 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 NAPRTQ6XQN6 538 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 ASRGL1Q7L266 308 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 METTL23Q86XA0 190 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 NUDCD1Q96RS6 583 aa12.18□□□□□ -0.46
PTPRN-204ENST00000423636 SPTBN5Q9NRC6 3674 aaKnown RBP12.18□□□□□ -0.46
PTPRN-204ENST00000423636 GPR182O15218 404 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 TM9SF1O15321 606 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 PDE5AO76074 875 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 POLBP06746 335 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 PRSS56P0CW18 603 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 ODC1P11926 461 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 ZFXP17010 805 aaPredicted RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 NR2C2P49116 596 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 CCL23P55773 120 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 SARNPP82979 210 aaKnown RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 MGAT5BQ3V5L5 792 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 ALFQ53S48 1182 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 DEFB128Q7Z7B8 93 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 MCUR1Q96AQ8 359 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 RTP4Q96DX8 246 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 THTPAQ9BU02 230 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 FRMD8P1Q9BZ68 369 aaPredicted RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 CRISPLD1Q9H336 500 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 NT5MQ9NPB1 228 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 RBM22Q9NW64 420 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 ATXN2Q99700 1313 aaKnown RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 TMEM233B4DJY2 109 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 KRT36O76013 467 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 PDHA1P08559 390 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 CA8P35219 290 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 GRM3Q14832 879 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 ARL13BQ3SXY8 428 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 INTS6LQ5JSJ4 861 aaKnown RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 LGSNQ5TDP6 509 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 PRSS55Q6UWB4 352 aaPredicted RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 SCD5Q86SK9 330 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 RYBPQ8N488 228 aaPredicted RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 CCNYL1Q8N7R7 359 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 N4BP2L2Q92802 583 aaPredicted RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 FAM161BQ96MY7 647 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 CYLDQ9NQC7 956 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 MOCS1Q9NZB8 636 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 BFARQ9NZS9 450 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 GMIPQ9P107 970 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 GOLGA4Q13439 2230 aaKnown RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 TADA2AO75478 443 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 DCTN3O75935 186 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 HAPLN1P10915 354 aaPredicted RBP12.17□□□□□ -0.46
PTPRN-204ENST00000423636 CCNB1P14635 433 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 RALGPS1Q5JS13 557 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 RAP1GAP2Q684P5 730 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 TAS1R1Q7RTX1 841 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 SLC2A13Q96QE2 648 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 GPR62Q9BZJ7 368 aa12.17□□□□□ -0.46
PTPRN-204ENST00000423636 XAB2Q9HCS7 855 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms