RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DSG4Q86SJ6 1040 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 GUF1Q8N442 669 aaKnown RBP17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 UBR7Q8N806 425 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 HSFY1Q96LI6 401 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 SERPINB11Q96P15 392 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 USP29Q9HBJ7 922 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 PPM1HQ9ULR3 514 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 K7ENP7 123 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 PIAS2O75928 621 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 THEGLP0DJG4 465 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 RGS7P49802 495 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 YWHAEP62258 255 aaKnown RBP17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 CNTN1Q12860 1018 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 ATL3Q6DD88 541 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 INO80CQ6PI98 192 aaPredicted RBP17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 TMC6Q7Z403 805 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 DQX1Q8TE96 717 aaKnown RBP17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 CLEC4CQ8WTT0 213 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 GRAMD1AQ96CP6 724 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 VCPIP1Q96JH7 1222 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 APOLD1Q96LR9 279 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 PREBQ9HCU5 417 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 NLGN3Q9NZ94 848 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 RCOR1Q9UKL0 485 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 MAPK8IP1Q9UQF2 711 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 CA5BQ9Y2D0 317 aa17.25■□□□□ 0.35
CHCHD3-202ENST00000423635 LY6G6EA0A0G2JKS1 128 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 PYCARD-AS1I3L0S3 204 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 PIK3R2O00459 728 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 FBXO21O94952 628 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 PAEPP09466 180 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 ALPPL2P10696 532 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 DUSP3P51452 185 aaPredicted RBP17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 CNGA2Q16280 664 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 ISXQ2M1V0 245 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 EDRF1Q3B7T1 1238 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 CBWD6Q4V339 395 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 CBWD3Q5JTY5 395 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 CBWD5Q5RIA9 395 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 NEK5Q6P3R8 708 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 BEND5Q7L4P6 421 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 LGI2Q8N0V4 545 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 OR8D1Q8WZ84 308 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 TFAP2BQ92481 460 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 IFT43Q96FT9 208 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 SLC46A1Q96NT5 459 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 ABCG4Q9H172 646 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 TJP2Q9UDY2 1190 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 XPO7Q9UIA9 1087 aaKnown RBP17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 U3KQA8 63 aa17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 NYNRINQ9P2P1 1898 aaKnown RBP17.24■□□□□ 0.35
CHCHD3-202ENST00000423635 NEMP2A6NFY4 417 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 MCF2LO15068 1137 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 SCAMP1O15126 338 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 ALOX15BO15296 676 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 FFAR2O15552 330 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 ATP9BO43861 1147 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 SLC28A2O43868 658 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 TAS2R38P59533 333 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 CCDC47Q96A33 483 aaKnown RBP17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 CCDC97Q96F63 343 aaPredicted RBP17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 DUSP23Q9BVJ7 150 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 CFAP45Q9UL16 551 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 NAALADL1Q9UQQ1 740 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 PIEZO2Q9H5I5 2752 aa17.23■□□□□ 0.35
CHCHD3-202ENST00000423635 A0A1W2PNU3 283 aaPredicted RBP17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 C1QTNF3-AMACRE9PGA6 284 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 TACR2P21452 398 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 CMA1P23946 247 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 RPL34P49207 117 aaKnown RBP17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 CSRP3P50461 194 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 POM121L1PQ3SYA9 428 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 FOXD4L6Q3SYB3 417 aaPredicted RBP17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 RAP1GAP2Q684P5 730 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 FOXD4L3Q6VB84 417 aaPredicted RBP17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 ALG14Q96F25 216 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 PRR11Q96HE9 360 aaPredicted RBP17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 ZSWIM1Q9BR11 485 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 OSBPL2Q9H1P3 480 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 EVA1BQ9NVM1 165 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 SATB2Q9UPW6 733 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 PCDHGA8Q9Y5G5 932 aa17.22■□□□□ 0.35
CHCHD3-202ENST00000423635 A0A1B0GVL5 298 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 K7ESM1 405 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 SLC31A1O15431 190 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 MOCS2O96007 188 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 MYF5P13349 255 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 PFKFB1P16118 471 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 PDGFRAP16234 1089 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 TBXAS1P24557 533 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 RBMS1P29558 406 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 OXCT1P55809 520 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 DPYDQ12882 1025 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 EIF4EBP2Q13542 120 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 STILQ15468 1287 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 CCAR2Q8N163 923 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 FAM174AQ8TBP5 190 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms