RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 IFI16Q16666 785 aaKnown RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 PLEKHG6Q3KR16 790 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 PITRM1Q5JRX3 1037 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 LRRC38Q5VT99 294 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 EGFLAMQ63HQ2 1017 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 MBLAC2Q68D91 279 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 PKN3Q6P5Z2 889 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF662Q6ZS27 426 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 POLNQ7Z5Q5 900 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 SETD3Q86TU7 594 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 RHOT1Q8IXI2 618 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 AHI1Q8N157 1196 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 CCDC33Q8N5R6 958 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 RNF10Q8N5U6 811 aaKnown RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 ALLCQ8N6M5 410 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 RTL3Q8N8U3 475 aaKnown RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 LRRC57Q8N9N7 239 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 OR7D4Q8NG98 312 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 RPLP0P6Q8NHW5 317 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 KIAA1524Q8TCG1 905 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 WFIKKN2Q8TEU8 576 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 CYB5D2Q8WUJ1 264 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 ALG14Q96F25 216 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 CSPG4P5Q96PW8 444 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 ACOX2Q99424 681 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 FEM1AQ9BSK4 669 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 MUC3BQ9H195 1237 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 CATSPERBQ9H7T0 1116 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 POLR3BQ9NW08 1133 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-202ENST00000422544 OR51B4Q9Y5P0 310 aa9.52□□□□□ -0.89
PDGFC-202ENST00000422544 SPEGQ15772 3267 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 ILVBLA1L0T0 632 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 LRRD1A4D1F6 860 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 WASH4PA8MWX3 477 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 FGF10O15520 208 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 MAP3K13O43283 966 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 KLF8O95600 359 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 KDELR1P24390 212 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 ACVRL1P37023 503 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 ARL4AP40617 200 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 WASP42768 502 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 MAPKAPK2P49137 400 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF135P52742 658 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 MRPS21P82921 87 aaKnown RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 GNA12Q03113 381 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 SLC12A1Q13621 1099 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 DPYSQ14117 519 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 DPYSL3Q14195 570 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 DMC1Q14565 340 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 EIF4HQ15056 248 aaKnown RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 PDK2Q15119 407 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 MAP7D3Q8IWC1 876 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 CHPFQ8IZ52 775 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF513Q8N8E2 541 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 IL17RCQ8NAC3 791 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 NETO2Q8NC67 525 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 CCDC26Q8TAB7 109 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 FAM71BQ8TC56 605 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 UCMAQ8WVF2 138 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 TSC1Q92574 1164 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 KRT35Q92764 455 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 TTC17Q96AE7 1141 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 RNF25Q96BH1 459 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 PSMB7Q99436 277 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 CALN1Q9BXU9 219 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 CHRDQ9H2X0 955 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 RETREG1Q9H6L5 497 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 NOL6Q9H6R4 1146 aaKnown RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 ETNK2Q9NVF9 386 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 SPATA6Q9NWH7 488 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 C2orf42Q9NWW7 574 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 TRMT1Q9NXH9 659 aaKnown RBP9.51□□□□□ -0.89
PDGFC-202ENST00000422544 VPS28Q9UK41 221 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 PYCARDQ9ULZ3 195 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 PLA2G4CQ9UP65 541 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 MFHAS1Q9Y4C4 1052 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 CAPN6Q9Y6Q1 641 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 WDFY3Q8IZQ1 3526 aa9.51□□□□□ -0.89
PDGFC-202ENST00000422544 MED19A0JLT2 244 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 C3orf70A6NLC5 250 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 CHURC1-FNTBB4DL54 471 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 WASH3PC4AMC7 463 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 SGK1O00141 431 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 DCLK1O15075 740 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 PSTPIP1O43586 416 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 SNAP91O60641 907 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 RAMP2O60895 175 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ADAM23O75077 832 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ATG13O75143 517 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 KRT37O76014 449 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 FTCDO95954 541 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 KRT1P04264 644 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ATP5BP06576 529 aaKnown RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 DLDP09622 509 aaKnown RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 HNRNPLP14866 589 aaKnown RBP eCLIP9.5□□□□□ -0.893e-12■■■■□ 20
PDGFC-202ENST00000422544 GLDCP23378 1020 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms